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基于补丁图像的肌纤维母细胞瘤病变精确分类的深度卷积神经网络。

Deep Convolutional Neural Network for Accurate Classification of Myofibroblastic Lesions on Patch-Based Images.

机构信息

Faculdade de Odontologia de Piracicaba, Universidade de Campinas (FOP-UNICAMP), Piracicaba, São Paulo, Brazil.

Department of Oral Diagnosis, Oral Pathology Area Piracicaba Dental School, University of Campinas (UNICAMP), Av. Limeira, 901, 13.414-903, Piracicaba, São Paulo, Brazil.

出版信息

Head Neck Pathol. 2024 Oct 28;18(1):117. doi: 10.1007/s12105-024-01723-5.

Abstract

OBJECTIVE

This study aimed to implement and evaluate a Deep Convolutional Neural Network for classifying myofibroblastic lesions into benign and malignant categories based on patch-based images.

METHODS

A Residual Neural Network (ResNet50) model, pre-trained with weights from ImageNet, was fine-tuned to classify a cohort of 20 patients (11 benign and 9 malignant cases). Following annotation of tumor regions, the whole-slide images (WSIs) were fragmented into smaller patches (224 × 224 pixels). These patches were non-randomly divided into training (308,843 patches), validation (43,268 patches), and test (42,061 patches) subsets, maintaining a 78:11:11 ratio. The CNN training was caried out for 75 epochs utilizing a batch size of 4, the Adam optimizer, and a learning rate of 0.00001.

RESULTS

ResNet50 achieved an accuracy of 98.97%, precision of 99.91%, sensitivity of 97.98%, specificity of 99.91%, F1 score of 98.94%, and AUC of 0.99.

CONCLUSIONS

The ResNet50 model developed exhibited high accuracy during training and robust generalization capabilities in unseen data, indicating nearly flawless performance in distinguishing between benign and malignant myofibroblastic tumors, despite the small sample size. The excellent performance of the AI model in separating such histologically similar classes could be attributed to its ability to identify hidden discriminative features, as well as to use a wide range of features and benefit from proper data preprocessing.

摘要

目的

本研究旨在基于基于斑块的图像,实施并评估一种深度卷积神经网络,以将肌纤维母细胞瘤病变分类为良性和恶性类别。

方法

使用来自 ImageNet 的权重对 Residual Neural Network (ResNet50) 模型进行微调,以对 20 名患者(11 例良性和 9 例恶性病例)的队列进行分类。在对肿瘤区域进行注释后,将全切片图像(WSI)分为较小的斑块(224×224 像素)。这些斑块被非随机地分为训练(308843 个斑块)、验证(43268 个斑块)和测试(42061 个斑块)子集,保持 78:11:11 的比例。使用 4 的批量大小、Adam 优化器和 0.00001 的学习率,对 CNN 进行了 75 个时期的训练。

结果

ResNet50 的准确率为 98.97%,精确率为 99.91%,敏感度为 97.98%,特异性为 99.91%,F1 评分为 98.94%,AUC 为 0.99。

结论

尽管样本量较小,但在训练期间,ResNet50 模型表现出了很高的准确率和在未见数据中强大的泛化能力,表明其在区分良性和恶性肌纤维母细胞瘤方面几乎完美的表现。人工智能模型在分离这些组织学上相似的类别方面的出色表现可以归因于其识别隐藏的鉴别特征的能力,以及使用广泛的特征并受益于适当的数据预处理。

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