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基于人工神经网络利用血液代谢组学数据预测多发性硬化症

Artificial neural network-based prediction of multiple sclerosis using blood-based metabolomics data.

作者信息

Ata Nasar, Zahoor Insha, Hoda Nasrul, Adnan Syed Mohammed, Vijayakumar Senthilkumar, Louis Filious, Poisson Laila, Rattan Ramandeep, Kumar Nitesh, Cerghet Mirela, Giri Shailendra

机构信息

Department of Neurology, Henry Ford Health, Detroit, MI, 48202, USA.

Faculty of Engineering, Aligarh Muslim University, Aligarh, 202002, India.

出版信息

Mult Scler Relat Disord. 2024 Dec;92:105942. doi: 10.1016/j.msard.2024.105942. Epub 2024 Oct 15.

Abstract

Multiple sclerosis (MS) remains a challenging neurological condition for diagnosis and management and is often detected in late stages, delaying treatment. Artificial intelligence (AI) is emerging as a promising approach to extracting MS information when applied to different patient datasets. Given the critical role of metabolites in MS profiling, metabolomics data may be an ideal platform for the application of AI to predict disease. In the present study, a machine-learning (ML) approach was used for a detailed analysis of metabolite profiles and related pathways in patients with MS and healthy controls (HC). This approach identified unique alterations in biochemical metabolites and their correlation with disease severity parameters. To enhance the efficiency of using metabolic profiles to determine disease severity or the presence of MS, we trained an AI model on a large volume of blood-based metabolomics datasets. We constructed this model using an artificial neural network (ANN) architecture with perceptrons. Data were divided into training, validation, and testing sets to determine model accuracy. After training, accuracy reached 87 %, sensitivity was 82.5 %, specificity was 89 %, and precision was 77.3 %. Thus, the developed model seems highly robust, generalizable with a wide scope and can handle large amounts of data, which could potentially assist neurologists. However, a large multicenter cohort study is necessary for further validation of large-scale datasets to allow the integration of AI in clinical settings for accurate diagnosis and improved MS management.

摘要

多发性硬化症(MS)在诊断和管理方面仍然是一个具有挑战性的神经疾病,且往往在晚期才被发现,从而延误了治疗。人工智能(AI)在应用于不同患者数据集时,正成为一种提取MS信息的有前景的方法。鉴于代谢物在MS分析中的关键作用,代谢组学数据可能是应用AI预测疾病的理想平台。在本研究中,采用机器学习(ML)方法对MS患者和健康对照(HC)的代谢物谱及相关途径进行了详细分析。该方法确定了生化代谢物的独特变化及其与疾病严重程度参数的相关性。为了提高利用代谢谱确定疾病严重程度或MS存在与否的效率,我们在大量基于血液的代谢组学数据集上训练了一个AI模型。我们使用具有感知器的人工神经网络(ANN)架构构建了这个模型。数据被分为训练集、验证集和测试集以确定模型的准确性。训练后,准确率达到87%,灵敏度为82.5%,特异性为89%,精确率为77.3%。因此,所开发的模型似乎非常稳健,具有广泛的通用性且能处理大量数据,这可能对神经科医生有所帮助。然而,需要进行大规模多中心队列研究以进一步验证大规模数据集,从而使AI能够整合到临床环境中以实现准确诊断和改善MS管理。

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本文引用的文献

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A Survey of Convolutional Neural Networks: Analysis, Applications, and Prospects.卷积神经网络综述:分析、应用与展望
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