College of Life Science and Food Engineering, Inner Mongolia Minzu University, Tongliao, 028000, China.
Inner Mongolia Collaborative Innovation Center for Castor Industry, Tongliao, 028000, China.
BMC Genomics. 2024 Nov 20;25(1):1115. doi: 10.1186/s12864-024-11027-1.
Heterotrimeric G proteins are crucial signaling molecules involved in cell signaling, plant development, and stress response. However, the genome-wide identification and analysis of G proteins in castor (Ricinus communis L.) have not been researched.
In this study, RcG-protein genes were identified using a sequence alignment method and analyzed by bioinformatics and expression analysis in response to salt stress. The results showed that a total of 9 G-protein family members were identified in the castor genome, which were classified into three subgroups, with the majority of RcG-proteins showing homology to soybean G-protein members. The promoter regions of all RcG-protein genes contained antioxidant response elements and ABA-responsive elements. Go enrichment analysis displayed that RcG-protein genes were involved in the G protein-coupled receptor signaling pathway, regulation of root development, and response to the bacterium. Real-time PCR showed varying responses of all RcG-protein genes to salt stress. RcGB1 was notably expressed in both roots and leaves under salt treatment, suggesting that it may be an essential gene associated with salt tolerance in the castor.
This study offers a theoretical framework for exploring G-protein function and presents potential genetic assets for improving crop resilience through genetic enhancement.
三聚体 G 蛋白是参与细胞信号转导、植物发育和应激反应的关键信号分子。然而,关于蓖麻(Ricinus communis L.)中 G 蛋白的全基因组鉴定和分析尚未得到研究。
本研究采用序列比对方法鉴定了蓖麻中的 RcG-蛋白基因,并通过生物信息学和对盐胁迫的表达分析进行了分析。结果表明,在蓖麻基因组中总共鉴定出 9 个 G 蛋白家族成员,它们分为三个亚组,大多数 RcG-蛋白与大豆 G 蛋白成员具有同源性。所有 RcG-蛋白基因的启动子区域都包含抗氧化反应元件和 ABA 反应元件。GO 富集分析显示,RcG-蛋白基因参与 G 蛋白偶联受体信号通路、根发育的调节以及对细菌的反应。实时 PCR 显示所有 RcG-蛋白基因对盐胁迫的反应不同。RcGB1 在盐处理下在根和叶中均有明显表达,表明它可能是与蓖麻耐盐性相关的必需基因。
本研究为探索 G 蛋白功能提供了理论框架,并为通过遗传增强提高作物抗逆性提供了潜在的遗传资源。