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能与水分子协同识别单磷酸根阴离子的酰胺环糊精。

Amide cyclodextrin that recognises monophosphate anions in harmony with water molecules.

作者信息

Nakamura Takashi, Takayanagi Hayato, Nakahata Masaki, Okubayashi Takumi, Baba Hitomi, Ishii Yoshiki, Watanabe Go, Tanabe Daisuke, Nabeshima Tatsuya

机构信息

Institute of Pure and Applied Sciences, University of Tsukuba 1-1-1 Tennodai Tsukuba Ibaraki 305-8571 Japan

Degree Programs in Pure and Applied Sciences, Graduate School of Science and Technology, University of Tsukuba 1-1-1 Tennodai Tsukuba Ibaraki 305-8571 Japan.

出版信息

Chem Sci. 2024 Nov 4;16(1):171-181. doi: 10.1039/d4sc04529g. eCollection 2024 Dec 18.

DOI:10.1039/d4sc04529g
PMID:39583557
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11583042/
Abstract

Anion recognition in water by synthetic host molecules is a popular and challenging topic. It has been considered difficult because the water molecules compete for the recognition units. In this study, we have successfully created a novel macrocycle that achieves precise recognition through multipoint hydrogen bonding in harmony with water molecules. Specifically, an -methylpyridinium amide β-cyclodextrin (β-CD) derivative 1(OTf) was synthesized, whose amide groups are directly attached to each pyranose ring. The pyridinium amide CD encapsulated a monophosphate anion in water, but it did not show interactions with sulfonates or carboxylates, thus a remarkable selectivity was demonstrated. Two monophosphates with different substituents, phenyl phosphate (PhOPO ) and adamantyl phosphate (AdOPO ), exhibited interesting contrasting pictures in the inclusion process, which were revealed by a combination of NOESY experiments, ITC measurements, and MD simulations. PhOPO was positioned slightly "upper" (closer to the pyridinium amide side) in 1 with the oxygen atom of the phosphate ester R-O-P involved in the hydrogen bonds with the amide N-H, and configurational entropy plays a key role in the inclusion. Meanwhile, AdOPO was positioned "lower" (closer to the methoxy rim of CD) with the terminal -PO forming hydrogen bonds with the amides, and the hydrophobic effect is a major contributing driving force of the inclusion. The molecular design presented herein to achieve the precise recognition in water and clarification of the detailed mechanisms including the hydration phenomenon greatly contribute to the development of functional molecules that work in aqueous environments.

摘要

合成主体分子在水中对阴离子的识别是一个热门且具有挑战性的课题。由于水分子会与识别单元竞争,因此一直被认为具有难度。在本研究中,我们成功创建了一种新型大环化合物,它通过与水分子协同的多点氢键作用实现了精确识别。具体而言,合成了一种α-甲基吡啶鎓酰胺β-环糊精(β-CD)衍生物1(OTf),其酰胺基团直接连接在每个吡喃糖环上。吡啶鎓酰胺环糊精在水中包封了单磷酸根阴离子,但它与磺酸根或羧酸根没有相互作用,从而显示出显著的选择性。两种具有不同取代基的单磷酸酯,苯基磷酸酯(PhOPO)和金刚烷基磷酸酯(AdOPO),在包合过程中呈现出有趣的对比情况,这通过NOESY实验、等温滴定量热法(ITC)测量和分子动力学(MD)模拟相结合得以揭示。PhOPO在1中略微位于“上方”(更靠近吡啶鎓酰胺一侧),磷酸酯R-O-P的氧原子参与与酰胺N-H的氢键形成,并且构象熵在包合过程中起关键作用。同时,AdOPO位于“下方”(更靠近环糊精的甲氧基边缘),末端-PO₃²⁻与酰胺形成氢键,疏水效应是包合的主要驱动因素。本文提出的分子设计实现了在水中的精确识别,并阐明了包括水合现象在内的详细机制,这对在水性环境中起作用的功能分子的开发有很大贡献。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dc8e/11653521/96a641ceaf19/d4sc04529g-f8.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dc8e/11653521/8546f53d3cc3/d4sc04529g-f7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dc8e/11653521/96a641ceaf19/d4sc04529g-f8.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dc8e/11653521/962485ce9f0c/d4sc04529g-f1.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dc8e/11653521/c5920232b4e9/d4sc04529g-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dc8e/11653521/576bf0553957/d4sc04529g-f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dc8e/11653521/9c3630e34671/d4sc04529g-f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dc8e/11653521/8546f53d3cc3/d4sc04529g-f7.jpg
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