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[物种名称]中含BURP结构域基因家族的全基因组分析及干旱和盐胁迫下的功能分析

Genome-Wide Analysis of BURP Domain-Containing Gene Family in and Functional Analysis of Under Drought and Salt Stresses.

作者信息

Sun Huiru, Yang Jinyu, Fan Bei, Ren Min, Wang Yanfeng, Chen Guoliang, Cheng Guoting

机构信息

College of Life Sciences, Yan'an University, Yan'an 716000, China.

Shaanxi Key Laboratory of Research and Utilization of Resource Plants on the Loess Plateau, College of Life Sciences, Yan'an University, Yan'an 716000, China.

出版信息

Int J Mol Sci. 2024 Nov 22;25(23):12539. doi: 10.3390/ijms252312539.

Abstract

The BURP domain-containing () genes belong to plant-specific families and are known as essential for various biological processes in plants. However, knowledge of the functions of genes in tomato () is lacking. In our study, bioinformatics analysis was performed for the gene family, including phylogeny, chromosomal localization, gene structure, -acting elements and expression. In addition, the function of in drought and salt stresses was explored. In tomato, fourteen family members were identified, located on five chromosomes, including two tandem duplication clusters. These BURP members were classified into four subfamilies. The promoter regions of harbored numerous hormone- and stress-response elements. Tissue expression analysis showed that several were highly expressed in roots, flowers or fruits. Meanwhile, the expressions of most could be regulated by drought, salt and cold treatments, and some of them also responded to ABA treatment. Moreover, the ectopic expression of in enhanced tolerances to drought and salt stresses and increased the sensitivity of seed germination to ABA. In conclusion, the comprehensive analysis of the family in tomato and the functional exploration of in drought and salt stresses provide a basis for further dissecting the roles of tomato genes.

摘要

含BURP结构域的()基因属于植物特有的基因家族,已知对植物的各种生物学过程至关重要。然而,关于番茄()中基因功能的知识却很缺乏。在我们的研究中,对该基因家族进行了生物信息学分析,包括系统发育、染色体定位、基因结构、顺式作用元件和表达。此外,还探究了在干旱和盐胁迫中的功能。在番茄中,鉴定出了14个该家族成员,分布在5条染色体上,包括两个串联重复簇。这些BURP成员被分为四个亚家族。的启动子区域含有大量激素和胁迫响应元件。组织表达分析表明,有几个在根、花或果实中高表达。同时,大多数的表达可受干旱、盐和冷处理调控,其中一些还对ABA处理有响应。此外,在中的异位表达增强了对干旱和盐胁迫的耐受性,并增加了种子萌发对ABA的敏感性。总之,对番茄中该家族的综合分析以及对在干旱和盐胁迫中的功能探究为进一步剖析番茄基因的作用提供了依据。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9b0c/11641390/f4e04c43550e/ijms-25-12539-g001.jpg

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