• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

基于子结构域迁移学习的毕赤酵母发酵过程软传感器建模方法

Soft sensor modeling method for Pichia pastoris fermentation process based on substructure domain transfer learning.

作者信息

Wang Bo, Wei Jun, Zhang Le, Jiang Hui, Jin Cheng, Huang Shaowen

机构信息

Key Laboratory of Agricultural Measurement and Control Technology and Equipment for Mechanical Industrial Facilities, School of Electrical and Information Engineering, Jiangsu University, Zhenjiang, 212013, China.

Wuxi Key Laboratory of Intelligent Robot and Special Equipment Technology, Wuxi Taihu University, Wuxi, 214064, China.

出版信息

BMC Biotechnol. 2024 Dec 18;24(1):104. doi: 10.1186/s12896-024-00928-4.

DOI:10.1186/s12896-024-00928-4
PMID:39696295
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11653563/
Abstract

BACKGROUND

Aiming at the problem that traditional transfer methods are prone to lose data information in the overall domain-level transfer, and it is difficult to achieve the perfect match between source and target domains, thus reducing the accuracy of the soft sensor model.

METHODS

This paper proposes a soft sensor modeling method based on the transfer modeling framework of substructure domain. Firstly, the Gaussian mixture model clustering algorithm is used to extract local information, cluster the source and target domains into multiple substructure domains, and adaptively weight the substructure domains according to the distances between the sub-source domains and sub-target domains. Secondly, the optimal subspace domain adaptation method integrating multiple metrics is used to obtain the optimal projection matrices and that are coupled with each other, and the data of source and target domains are projected to the corresponding subspace to perform spatial alignment, so as to reduce the discrepancy between the sample data of different working conditions. Finally, based on the source and target domain data after substructure domain adaptation, the least squares support vector machine algorithm is used to establish the prediction model.

RESULTS

Taking Pichia pastoris fermentation to produce inulinase as an example, the simulation results verify that the root mean square error of the proposed soft sensor model in predicting Pichia pastoris concentration and inulinase concentration is reduced by 48.7% and 54.9%, respectively.

CONCLUSION

The proposed soft sensor modeling method can accurately predict Pichia pastoris concentration and inulinase concentration online under different working conditions, and has higher prediction accuracy than the traditional soft sensor modeling method.

摘要

背景

针对传统迁移方法在整体域级迁移中容易丢失数据信息,且难以实现源域与目标域完美匹配,从而降低软测量模型精度的问题。

方法

本文提出一种基于子结构域迁移建模框架的软测量建模方法。首先,利用高斯混合模型聚类算法提取局部信息,将源域和目标域聚类为多个子结构域,并根据子源域与子目标域之间的距离对子结构域进行自适应加权。其次,采用集成多度量的最优子空间域自适应方法,获得相互耦合的最优投影矩阵 和 ,将源域和目标域的数据投影到相应子空间进行空间对齐,以减小不同工况样本数据之间的差异。最后,基于子结构域自适应后的源域和目标域数据,采用最小二乘支持向量机算法建立预测模型。

结果

以毕赤酵母发酵生产菊粉酶为例,仿真结果验证了所提软测量模型预测毕赤酵母浓度和菊粉酶浓度的均方根误差分别降低了48.7%和54.9%。

结论

所提软测量建模方法能够在不同工况下准确在线预测毕赤酵母浓度和菊粉酶浓度,且预测精度高于传统软测量建模方法。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8de7/11653563/62a24d4d39f6/12896_2024_928_Fig13_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8de7/11653563/4bb47da4d215/12896_2024_928_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8de7/11653563/b7fa2ea3d24a/12896_2024_928_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8de7/11653563/3eabc65596a4/12896_2024_928_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8de7/11653563/a492b01d2d52/12896_2024_928_Figa_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8de7/11653563/ad3a7dd76438/12896_2024_928_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8de7/11653563/192ff5700d3b/12896_2024_928_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8de7/11653563/c02560018f27/12896_2024_928_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8de7/11653563/77a60f451377/12896_2024_928_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8de7/11653563/d184b2f14aef/12896_2024_928_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8de7/11653563/307d6f98051d/12896_2024_928_Fig9_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8de7/11653563/f69883027cf9/12896_2024_928_Fig10_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8de7/11653563/7d374c6e67d7/12896_2024_928_Fig11_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8de7/11653563/83787ddc6b5c/12896_2024_928_Fig12_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8de7/11653563/62a24d4d39f6/12896_2024_928_Fig13_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8de7/11653563/4bb47da4d215/12896_2024_928_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8de7/11653563/b7fa2ea3d24a/12896_2024_928_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8de7/11653563/3eabc65596a4/12896_2024_928_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8de7/11653563/a492b01d2d52/12896_2024_928_Figa_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8de7/11653563/ad3a7dd76438/12896_2024_928_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8de7/11653563/192ff5700d3b/12896_2024_928_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8de7/11653563/c02560018f27/12896_2024_928_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8de7/11653563/77a60f451377/12896_2024_928_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8de7/11653563/d184b2f14aef/12896_2024_928_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8de7/11653563/307d6f98051d/12896_2024_928_Fig9_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8de7/11653563/f69883027cf9/12896_2024_928_Fig10_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8de7/11653563/7d374c6e67d7/12896_2024_928_Fig11_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8de7/11653563/83787ddc6b5c/12896_2024_928_Fig12_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8de7/11653563/62a24d4d39f6/12896_2024_928_Fig13_HTML.jpg

相似文献

1
Soft sensor modeling method for Pichia pastoris fermentation process based on substructure domain transfer learning.基于子结构域迁移学习的毕赤酵母发酵过程软传感器建模方法
BMC Biotechnol. 2024 Dec 18;24(1):104. doi: 10.1186/s12896-024-00928-4.
2
Modeling and Optimization of an Enhanced Soft Sensor for the Fermentation Process of .建立.发酵过程增强型软测量模型与优化
Sensors (Basel). 2024 May 9;24(10):3017. doi: 10.3390/s24103017.
3
Development and Optimization of a Novel Soft Sensor Modeling Method for Fermentation Process of .新型发酵过程软测量建模方法的开发与优化。
Sensors (Basel). 2023 Jun 29;23(13):6014. doi: 10.3390/s23136014.
4
Study on Multi-Model Soft Sensor Modeling Method and Its Model Optimization for the Fermentation Process of .基于 的发酵过程多模型软测量建模方法及其模型优化研究
Sensors (Basel). 2021 Nov 17;21(22):7635. doi: 10.3390/s21227635.
5
A soft sensor model of cell concentration based on IBDA-RELM.基于 IBDA-RELM 的细胞浓度软测量模型。
Prep Biochem Biotechnol. 2022;52(6):618-626. doi: 10.1080/10826068.2021.1980799. Epub 2021 Oct 20.
6
An online soft sensor method for biochemical reaction process based on JS-ISSA-XGBoost.基于 JS-ISSA-XGBoost 的生化反应过程在线软测量方法。
BMC Biotechnol. 2023 Nov 8;23(1):49. doi: 10.1186/s12896-023-00816-3.
7
Biomass soft sensor for a Pichia pastoris fed-batch process based on phase detection and hybrid modeling.基于相检测和混合建模的毕赤酵母分批发酵过程生物质软传感器。
Biotechnol Bioeng. 2020 Sep;117(9):2749-2759. doi: 10.1002/bit.27454. Epub 2020 Jul 11.
8
Research on soft sensing method of photosynthetic bacteria fermentation process based on ant colony algorithm and least squares support vector machine.基于蚁群算法和最小二乘支持向量机的光合细菌发酵过程软测量方法研究
Prep Biochem Biotechnol. 2023;53(4):341-352. doi: 10.1080/10826068.2022.2090002. Epub 2022 Jul 11.
9
Soft - sensing modeling based on ABC - MLSSVM inversion for marine low - temperature alkaline protease MP fermentation process.基于 ABC-MLSSVM 反演的软测量建模在海洋低温碱性蛋白酶 MP 发酵过程中的应用。
BMC Biotechnol. 2020 Feb 18;20(1):9. doi: 10.1186/s12896-020-0603-x.
10
Soft Sensor Modeling Method for the Marine Lysozyme Fermentation Process Based on ISOA-GPR Weighted Ensemble Learning.基于改进麻雀搜索算法-高斯过程回归加权集成学习的海洋溶菌酶发酵过程软测量建模方法
Sensors (Basel). 2023 Nov 11;23(22):9119. doi: 10.3390/s23229119.

引用本文的文献

1
Interpretable-AI-Based Model Structural Transfer Learning to Accelerate Bioprocess Model Construction.基于可解释人工智能的模型结构迁移学习以加速生物过程模型构建
Biotechnol Bioeng. 2025 Oct;122(10):2819-2831. doi: 10.1002/bit.70026. Epub 2025 Jul 18.

本文引用的文献

1
Heterologous expression of the novel dimeric antimicrobial peptide LIG in Pichia pastoris.新型二聚体抗菌肽 LIG 在毕赤酵母中的异源表达。
J Biotechnol. 2024 Feb 10;381:19-26. doi: 10.1016/j.jbiotec.2023.12.015. Epub 2024 Jan 3.
2
Current achievements, strategies, obstacles, and overcoming the challenges of the protein engineering in Pichia pastoris expression system.毕赤酵母表达系统中蛋白质工程的当前成就、策略、障碍及挑战应对
World J Microbiol Biotechnol. 2023 Dec 8;40(1):39. doi: 10.1007/s11274-023-03851-6.
3
Development of a continuous fermentation process for the production of recombinant uricase enzyme by Pichia pastoris.
利用毕赤酵母开发连续发酵生产重组尿酸酶的工艺。
Biotechnol Appl Biochem. 2024 Feb;71(1):123-131. doi: 10.1002/bab.2526. Epub 2023 Oct 16.
4
An evolutionary deep learning soft sensor model based on random forest feature selection technique for penicillin fermentation process.基于随机森林特征选择技术的青霉素发酵过程进化深度学习软测量模型。
ISA Trans. 2023 May;136:139-151. doi: 10.1016/j.isatra.2022.10.044. Epub 2022 Nov 2.
5
Production of a Hepatitis E Vaccine Candidate Using the Pichia pastoris Expression System.利用毕赤酵母表达系统生产戊型肝炎疫苗候选物。
Methods Mol Biol. 2022;2412:117-141. doi: 10.1007/978-1-0716-1892-9_7.
6
Study on Multi-Model Soft Sensor Modeling Method and Its Model Optimization for the Fermentation Process of .基于 的发酵过程多模型软测量建模方法及其模型优化研究
Sensors (Basel). 2021 Nov 17;21(22):7635. doi: 10.3390/s21227635.
7
Modelling of fermentative bioethanol production from indigenous Ulva prolifera biomass by Saccharomyces cerevisiae NFCCI1248 using an integrated ANN-GA approach.利用集成 ANN-GA 方法对土著绿藻生物质进行发酵生物乙醇生产的建模。
Sci Total Environ. 2021 Oct 15;791:148429. doi: 10.1016/j.scitotenv.2021.148429. Epub 2021 Jun 10.
8
A Deep Probabilistic Transfer Learning Framework for Soft Sensor Modeling With Missing Data.一种用于带缺失数据的软传感器建模的深度概率迁移学习框架。
IEEE Trans Neural Netw Learn Syst. 2022 Dec;33(12):7598-7609. doi: 10.1109/TNNLS.2021.3085869. Epub 2022 Nov 30.
9
Pichia pastoris: A highly successful expression system for optimal synthesis of heterologous proteins.毕赤酵母:一种高效的表达系统,可用于最优合成异源蛋白。
J Cell Physiol. 2020 Sep;235(9):5867-5881. doi: 10.1002/jcp.29583. Epub 2020 Feb 14.