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一种利用分裂荧光团对线虫体内内源性突触前蛋白进行标记的模块化系统。

A modular system to label endogenous presynaptic proteins using split fluorophores in Caenorhabditis elegans.

作者信息

Kurashina Mizuki, Snow Andrew W, Mizumoto Kota

机构信息

Graduate Program of Cell and Developmental Biology, Life Sciences Institute, The University of British Columbia, Vancouver, Canada V6T 1Z3.

Department of Zoology, The University of British Columbia, Vancouver, Canada V6T 1Z3.

出版信息

Genetics. 2025 Mar 17;229(3). doi: 10.1093/genetics/iyae214.

DOI:10.1093/genetics/iyae214
PMID:39708832
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11912834/
Abstract

Visualizing the subcellular localization of presynaptic proteins with fluorescent proteins is a powerful tool to dissect the genetic and molecular mechanisms underlying synapse formation and patterning in live animals. Here, we utilize split green and red fluorescent proteins to visualize the localization of endogenously expressed presynaptic proteins at a single-neuron resolution in Caenorhabditis elegans. By using CRISPR/Cas9 genome editing, we generated a collection of C. elegans strains in which endogenously expressed presynaptic proteins (RAB-3/Rab3, SNG-1/Synaptogyrin, CLA-1/Piccolo, SYD-2/Liprin-α, UNC-10/RIM, RIMB-1/RIM-BP, and ELKS-1/ELKS) are tagged with tandem repeats of GFP11 and/or wrmScarlet11. We show that the expression of GFP1-10 and wrmScarlet1-10 under neuron-specific promoters can robustly label presynaptic proteins in different neuron types. We believe that the combination of our knock-in strains and GFP1-10 and wrmScarlet1-10 plasmids is a versatile modular system useful for neuroscientists to examine the localization of endogenous presynaptic proteins in any neuron type in C. elegans.

摘要

利用荧光蛋白可视化突触前蛋白的亚细胞定位是剖析活体动物中突触形成和模式化潜在遗传和分子机制的有力工具。在这里,我们利用分裂的绿色和红色荧光蛋白,以单个神经元分辨率在秀丽隐杆线虫中可视化内源性表达的突触前蛋白的定位。通过使用CRISPR/Cas9基因组编辑,我们构建了一系列秀丽隐杆线虫菌株,其中内源性表达的突触前蛋白(RAB-3/Rab3、SNG-1/突触旋转蛋白、CLA-1/ piccolo、SYD-2/脂联蛋白-α、UNC-10/RIM、RIMB-1/RIM-BP和ELKS-1/ELKS)用GFP11和/或wrmScarlet11的串联重复序列进行标记。我们表明,在神经元特异性启动子下GFP1-10和wrmScarlet1-10的表达可以强有力地标记不同神经元类型中的突触前蛋白。我们相信,我们的敲入菌株与GFP1-10和wrmScarlet1-10质粒的组合是一个通用的模块化系统,有助于神经科学家检查秀丽隐杆线虫中任何神经元类型内源性突触前蛋白的定位。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6f21/11912834/41a56c2633fe/iyae214f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6f21/11912834/463143400c49/iyae214f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6f21/11912834/36323e99db08/iyae214f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6f21/11912834/bddad9abf6cd/iyae214f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6f21/11912834/62a5c223d1e4/iyae214f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6f21/11912834/41a56c2633fe/iyae214f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6f21/11912834/463143400c49/iyae214f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6f21/11912834/36323e99db08/iyae214f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6f21/11912834/bddad9abf6cd/iyae214f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6f21/11912834/62a5c223d1e4/iyae214f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6f21/11912834/41a56c2633fe/iyae214f5.jpg

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本文引用的文献

1
Comparative analysis of new mScarlet-based red fluorescent tags in Caenorhabditis elegans.新型基于 mScarlet 的红色荧光标签在秀丽隐杆线虫中的比较分析。
Genetics. 2024 Oct 7;228(2). doi: 10.1093/genetics/iyae126.
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Bright and stable monomeric green fluorescent protein derived from StayGold.来源于 StayGold 的明亮且稳定的单体绿色荧光蛋白。
Nat Methods. 2024 Apr;21(4):657-665. doi: 10.1038/s41592-024-02203-y. Epub 2024 Feb 26.
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TIAM-1 regulates polarized protrusions during dorsal intercalation in the Caenorhabditis elegans embryo through both its GEF and N-terminal domains.
TIAM-1 通过其 GEF 和 N 端结构域调节秀丽隐杆线虫胚胎背侧内插过程中的极化突起。
J Cell Sci. 2024 Mar 1;137(5). doi: 10.1242/jcs.261509. Epub 2024 Mar 6.
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The active zone protein Clarinet regulates synaptic sorting of ATG-9 and presynaptic autophagy.活性带蛋白 Clarinet 调控 ATG-9 的突触分拣和突触前自噬。
PLoS Biol. 2023 Apr 13;21(4):e3002030. doi: 10.1371/journal.pbio.3002030. eCollection 2023 Apr.
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mScarlet3: a brilliant and fast-maturing red fluorescent protein.mScarlet3:一种明亮且快速成熟的红色荧光蛋白。
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Split-wrmScarlet and split-sfGFP: tools for faster, easier fluorescent labeling of endogenous proteins in Caenorhabditis elegans.Split-wrmScarlet 和 split-sfGFP:在秀丽隐杆线虫中更快、更容易地对内源性蛋白进行荧光标记的工具。
Genetics. 2021 Apr 15;217(4). doi: 10.1093/genetics/iyab014.
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Melting dsDNA Donor Molecules Greatly Improves Precision Genome Editing in .融化 dsDNA 供体分子可极大提高. 中的精确基因组编辑效率。
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