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基于MXene的外泌体表面增强拉曼光谱分析用于肺癌的深度学习鉴别诊断

MXene-based SERS spectroscopic analysis of exosomes for lung cancer differential diagnosis with deep learning.

作者信息

Chen Xi, Liu Hongyi, Fan Dandan, Chen Nan, Ma Pei, Zhang Xuedian, Chen Hui

机构信息

Key Laboratory of Optical Technology and Instrument for Medicine, Ministry of Education, University of Shanghai for Science and Technology, 200093 Shanghai, China.

School of Electrical Engineering and Automation, Nantong University, Nantong 226019, China.

出版信息

Biomed Opt Express. 2024 Dec 23;16(1):303-319. doi: 10.1364/BOE.547176. eCollection 2025 Jan 1.

Abstract

Lung cancer with heterogeneity has a high mortality rate due to its late-stage detection and chemotherapy resistance. Liquid biopsy that discriminates tumor-related biomarkers in body fluids has emerged as an attractive technique for early-stage and accurate diagnosis. Exosomes, carrying membrane and cytosolic information from original tumor cells, impart themselves endogeneity and heterogeneity, which offer extensive and unique advantages in the field of liquid biopsy for cancer differential diagnosis. Herein, we demonstrate a Gramian angular summation field and MobileNet V2 (GASF-MobileNet)-assisted surface-enhanced Raman spectroscopy (SERS) technique for analyzing exosomes, aimed at precise diagnosis of lung cancer. Specifically, a composite substrate was synthesized for SERS detection of exosomes based on TiCTx Mxene and the array of gold-silver core-shell nanocubes (MGS), that combines sensitivity and signal stability. The employment of MXene facilitates the non-selective capture and enrichment of exosomes. To overcome the issue of potentially overlooking spatial features in spectral data analysis, 1-D spectra were first transformed into 2-D images through GASF. By using transformed images as the input data, a deep learning model based on the MobileNet V2 framework extracted spectral features from higher dimensions, which identified different non-small cell lung cancer (NSCLC) cell lines with an overall accuracy of 95.23%. Moreover, the area under the curve (AUC) for each category exceeded 0.95, demonstrating the great potential of integrating label-free SERS with deep learning for precise lung cancer differential diagnosis. This approach allows routine cancer management, and meanwhile, its non-specific analysis of SERS signatures is anticipated to be expanded to other cancers.

摘要

具有异质性的肺癌由于其晚期检测和化疗耐药性而具有较高的死亡率。能够识别体液中肿瘤相关生物标志物的液体活检已成为一种有吸引力的早期准确诊断技术。外泌体携带原始肿瘤细胞的膜和胞质信息,具有内源性和异质性,这在癌症鉴别诊断的液体活检领域提供了广泛而独特的优势。在此,我们展示了一种用于分析外泌体的格拉姆角和场与MobileNet V2(GASF-MobileNet)辅助的表面增强拉曼光谱(SERS)技术,旨在实现肺癌的精确诊断。具体而言,基于TiCTx MXene和金银核壳纳米立方体阵列(MGS)合成了一种用于SERS检测外泌体的复合基底,该基底兼具灵敏度和信号稳定性。MXene的使用有助于非选择性捕获和富集外泌体。为了克服光谱数据分析中可能忽略空间特征的问题,首先通过GASF将一维光谱转换为二维图像。以转换后的图像作为输入数据,基于MobileNet V2框架的深度学习模型从更高维度提取光谱特征,其识别不同非小细胞肺癌(NSCLC)细胞系的总体准确率为95.23%。此外,每一类别的曲线下面积(AUC)均超过0.95,这表明将无标记SERS与深度学习相结合用于精确肺癌鉴别诊断具有巨大潜力。这种方法可用于常规癌症管理,同时,其对SERS特征的非特异性分析有望扩展到其他癌症。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a9e3/11729284/1bfa116063ed/boe-16-1-303-g001.jpg

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