Khakurel Krishna Prasad, Nemergut Michal, Pant Purbaj, Savko Martin, Andreasson Jakob, Žoldák Gabriel
ELI Beamlines Facility, The Extreme Light Infrastructure ERIC, Za Radnicí 835, 25241, Dolní Břežany, Czech Republic.
Center for Interdisciplinary Biosciences, Technology and Innovation Park, P. J. Šafárik University, Košice, Slovakia.
Eur Biophys J. 2025 Feb;54(1-2):89-95. doi: 10.1007/s00249-025-01731-5. Epub 2025 Jan 22.
X-ray crystallography has tremendously served structural biology by routinely providing high-resolution 3D structures of macromolecules. The extent of information encoded in the X-ray crystallography is proportional to which resolution the crystals diffract and the structure can be refined to. Therefore, there is a continuous effort to obtain high-quality crystals, especially for those proteins, which are considered difficult to crystallize into high-quality protein crystals of suitable sizes for X-ray crystallography. Efforts in enhancing the resolution in X-ray crystallography have also been made by optimizing crystallization protocols using external stimuli such as an electric field and magnetic field during the crystallization. Here, we present the feasibility of on-the-fly post-crystallization resolution enhancement of the protein crystal diffraction by applying a high-voltage electric field. The electric field between 2 and 11 kV/cm, which was applied after mounting the crystals in the beamline, resulted in the enhancement of the resolution. The crystal diffraction quality improved progressively with the exposure time. Moreover, we also find that upto defined electric field threshold, the protein structure remains largely unperturbed, a conclusion further supported by molecular dynamics simulations.
X射线晶体学通过常规提供大分子的高分辨率三维结构,极大地推动了结构生物学的发展。X射线晶体学所编码的信息量与晶体衍射的分辨率以及结构能够精修到的分辨率成正比。因此,人们一直在不断努力获得高质量的晶体,尤其是对于那些被认为难以结晶成适合X射线晶体学的合适尺寸高质量蛋白质晶体的蛋白质。在结晶过程中,通过使用电场和磁场等外部刺激优化结晶方案,也在努力提高X射线晶体学的分辨率。在此,我们展示了通过施加高压电场对蛋白质晶体衍射进行实时结晶后分辨率增强的可行性。在将晶体安装到光束线中后施加2至11 kV/cm的电场,导致分辨率提高。晶体衍射质量随着曝光时间逐渐改善。此外,我们还发现,在达到确定的电场阈值之前,蛋白质结构基本保持不变,分子动力学模拟进一步支持了这一结论。