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提高秀丽隐杆线虫趋化性实验的可重复性

Enhancing Reproducibility in Chemotaxis Assays for Caenorhabditis elegans.

作者信息

Cesar Leona, Morud Julia

机构信息

Department of Chemistry and Molecular Biology, University of Gothenburg, Gothenburg, Sweden.

出版信息

Curr Protoc. 2025 Feb;5(2):e70106. doi: 10.1002/cpz1.70106.

Abstract

The ability of Caenorhabditis elegans (C. elegans) to navigate complex environments is essential for their survival. This natural behavior is commonly used in chemotaxis assays, which are important tools for studying the function of sensory neurons and neural circuits. Chemotaxis has been essential for discovering fundamental functions in neuronal signaling during the past decades. However, a lack of thoroughly optimized and standardized procedures can lead to variable results that can be difficult to interpret. To improve reproducibility, we optimized several aspects of chemotaxis protocols by testing different odorant concentrations, numbers of worms, and assay durations, as well as the preparation of chemotaxis plates and the washing procedures of worms. The usage of a 2-choice or a 4-choice assay was also evaluated. Our new protocol improves the clarity of results and simplifies worm counting. The protocol optimization is condensed into a 5-day step-by-step protocol that increases the reproducibility of chemotaxis in C. elegans. Compared to previously published chemotaxis protocols, the revised method reduces day-to-day variability using an improved and standardized assay design that ensures clear and reliable results. Several key components in the assay preparation and during the assay have been evaluated based on previous protocols, such as odor concentration, worm density, and assay length. By considering multiple factors that influence the worm's behavior, our optimized protocol enhances the reproducibility of chemotaxis assays in C. elegans, making them more reliable and accessible for studying phenotypes related to olfaction and neural circuit behavior. © 2025 The Author(s). Current Protocols published by Wiley Periodicals LLC. Basic Protocol: Optimized Chemotaxis Assay for C. elegans.

摘要

秀丽隐杆线虫(C. elegans)在复杂环境中导航的能力对其生存至关重要。这种自然行为常用于趋化性测定,趋化性测定是研究感觉神经元和神经回路功能的重要工具。在过去几十年中,趋化性对于发现神经元信号传导的基本功能至关重要。然而,缺乏彻底优化和标准化的程序可能导致结果可变,难以解释。为了提高可重复性,我们通过测试不同的气味剂浓度、线虫数量和测定持续时间,以及趋化性平板的制备和线虫的洗涤程序,优化了趋化性实验方案的几个方面。还评估了二选一或四选一测定法的使用。我们的新方案提高了结果的清晰度并简化了线虫计数。方案优化被浓缩为一个为期5天的分步方案,提高了秀丽隐杆线虫趋化性的可重复性。与之前发表的趋化性方案相比,修订后的方法使用改进的标准化测定设计减少了日常变异性,确保了清晰可靠的结果。基于之前的方案,对测定准备和测定过程中的几个关键因素进行了评估,如气味浓度、线虫密度和测定时长。通过考虑影响线虫行为的多个因素,我们优化的方案提高了秀丽隐杆线虫趋化性测定的可重复性,使其在研究与嗅觉和神经回路行为相关的表型时更可靠、更易于操作。© 2025作者。由Wiley Periodicals LLC出版的《Current Protocols》。基本方案:秀丽隐杆线虫的优化趋化性测定。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/795f/11834369/23ad2faa8a2f/CPZ1-5-0-g001.jpg

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