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急性心肌梗死和缺血性心肌病中线粒体自噬相关基因的鉴定与验证以及不同风险组免疫机制的研究

Identification and validation of mitophagy-related genes in acute myocardial infarction and ischemic cardiomyopathy and study of immune mechanisms across different risk groups.

作者信息

Hao Ying, Li RuiLin, Fan ChengHui, Gao Yang, Hou Xia, Wen Wei, Shen YunLi

机构信息

Department of Cardiovascular Medicine, State Key Laboratory of Cardiovascular Diseases and Medical Innovation Center, Shanghai East Hospital, School of Medicine, Tongji University, Shanghai, China.

Department of Cardiovascular Medicine, Shanghai East Hospital Ji'an Hospital, Ji'an, Jiangxi, China.

出版信息

Front Immunol. 2025 Mar 6;16:1486961. doi: 10.3389/fimmu.2025.1486961. eCollection 2025.

Abstract

INTRODUCTION

Acute myocardial infarction (AMI) is a critical condition that can lead to ischemic cardiomyopathy (ICM), a subsequent heart failure state characterized by compromised cardiac function.

METHODS

This study investigates the role of mitophagy in the transition from AMI to ICM. We analyzed AMI and ICM datasets from GEO, identifying mitophagy-related differentially expressed genes (MRDEGs) through databases like GeneCards and Molecular Signatures Database, followed by functional enrichment and Protein-Protein Interaction analyses. Logistic regression, Support Vector Machine, and LASSO (Least Absolute Shrinkage and Selection Operator) were employed to pinpoint key MRDEGs and develop diagnostic models, with risk stratification performed using LASSO scores. Subgroup analyses included functional enrichment and immune infiltration analysis, along with protein domain predictions and the integration of regulatory networks involving Transcription Factors, miRNAs, and RNA-Binding Proteins, leading to drug target identification.

RESULTS

The TGFβ pathway showed significant differences between high- and low-risk groups in AMI and ICM. Notably, in the AMI low-risk group, MRDEGs correlated positively with activated CD4+ T cells and negatively with Type 17 T helper cells, while in the AMI high-risk group, RPS11 showed a positive correlation with natural killer cells. In ICM, MRPS5 demonstrated a negative correlation with activated CD4+ T cells in the low-risk group and with memory B cells, mast cells, and dendritic cells in the high-risk group. The diagnostic accuracy of RPS11 was validated with an area under the curve (AUC) of 0.794 across diverse experimental approaches including blood samples, animal models, and myocardial hypoxia/reoxygenation models.

CONCLUSIONS

This study underscores the critical role of mitophagy in the transition from AMI to ICM, highlighting RPS11 as a highly significant biomarker with promising diagnostic potential and therapeutic implications.

摘要

引言

急性心肌梗死(AMI)是一种危急病症,可导致缺血性心肌病(ICM),这是一种随后出现的以心脏功能受损为特征的心力衰竭状态。

方法

本研究调查了线粒体自噬在从AMI转变为ICM过程中的作用。我们分析了来自基因表达综合数据库(GEO)的AMI和ICM数据集,通过诸如基因卡片(GeneCards)和分子特征数据库等数据库识别线粒体自噬相关差异表达基因(MRDEGs),随后进行功能富集和蛋白质-蛋白质相互作用分析。采用逻辑回归、支持向量机和套索(Least Absolute Shrinkage and Selection Operator,LASSO)算法来确定关键的MRDEGs并建立诊断模型,使用LASSO评分进行风险分层。亚组分析包括功能富集和免疫浸润分析,以及蛋白质结构域预测和涉及转录因子、微小RNA(miRNAs)和RNA结合蛋白的调控网络整合,从而确定药物靶点。

结果

转化生长因子β(TGFβ)通路在AMI和ICM的高风险组与低风险组之间表现出显著差异。值得注意的是,在AMI低风险组中,MRDEGs与活化的CD4 + T细胞呈正相关,与17型辅助性T细胞呈负相关,而在AMI高风险组中,核糖体蛋白S11(RPS11)与自然杀伤细胞呈正相关。在ICM中,线粒体核糖体蛋白S5(MRPS5)在低风险组中与活化的CD4 + T细胞呈负相关,在高风险组中与记忆B细胞、肥大细胞和树突状细胞呈负相关。通过包括血液样本、动物模型和心肌缺氧/复氧模型在内的多种实验方法,核糖体蛋白S11(RPS11)的诊断准确性得到验证,曲线下面积(AUC)为0.794。

结论

本研究强调了线粒体自噬在从AMI转变为ICM过程中的关键作用,突出了RPS11作为具有前景的诊断潜力和治疗意义的高度重要生物标志物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d06c/11922711/b6cec77a8f07/fimmu-16-1486961-g001.jpg

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