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对来自东南亚一名晚更新世个体的古代DNA序列的担忧。

Concerns about ancient DNA sequences reported from a Late Pleistocene individual from Southeast Asia.

作者信息

Tabin Daniel, Patterson Nick, Mah Matthew, Reich David

机构信息

Department of Human Evolutionary Biology, Harvard University, Cambridge, MA 02138, USA.

Department of Human Evolutionary Biology, Harvard University, Cambridge, MA 02138, USA; Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA.

出版信息

Curr Biol. 2025 Mar 24;35(6):R212-R213. doi: 10.1016/j.cub.2024.10.012.

Abstract

In a 2022 Current Biology paper, Zhang et al. reported DNA sequences from an approximately 14-thousand-year-old female skeleton from Red Deer Cave referred to as 'Mengzi Ren' (MZR). MZR's data are the first DNA sequences reported from pre-Holocene Southeast Asia, revealing genetic affinities dissimilar to all previously published ancient DNA data. Here, we show extremely high error rates, an abnormal error distribution and evidence of contamination by modern human sequences in the published DNA sequences of MZR. Even ignoring these issues, we fail to replicate key population genetic findings of Zhang et al., namely that Native Americans are equally related to MZR and ancient Northeast Asians. These results raise concerns regarding the paper's conclusions about population history, such as the claim that there was "an express northward expansion of AMHs starting in southern East Asia through the coastal line of China … eventually crossing the Bering Strait and reaching the Americas," and also about the general usability of the published sequences.

摘要

在2022年发表于《当代生物学》的一篇论文中,张等人报告了来自红鹿洞一具约14000年前女性骨骼(称为“蒙自人”,简称MZR)的DNA序列。MZR的数据是全新世之前东南亚地区首次报告的DNA序列,揭示了与所有先前公布的古代DNA数据不同的基因亲缘关系。在这里,我们发现已发表的MZR DNA序列存在极高的错误率、异常的错误分布以及被现代人类序列污染的证据。即便忽略这些问题,我们也无法重现张等人的关键群体遗传学发现,即美洲原住民与MZR和古代东北亚人具有同等的亲缘关系。这些结果引发了对该论文关于群体历史结论的担忧,比如声称“现代人类从东亚南部开始沿着中国海岸线向北快速扩张……最终穿越白令海峡到达美洲”,同时也引发了对已发表序列普遍可用性的担忧。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e48d/12037273/95c139496a7d/nihms-2073594-f0001.jpg

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