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解析……的基因组流行病学及质粒介导的碳青霉烯类耐药性

Unraveling the genomic epidemiology and plasmid-mediated carbapenem resistance of .

作者信息

Li Xinyue, Song Zexuan, Liu Jinshuo, Jin Jingguang, Wan Hanxia, Chen Huimin, Luo Xinhua

机构信息

National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China.

The First Clinical College, Wenzhou Medical University, Wenzhou, China.

出版信息

Front Microbiol. 2025 Mar 17;16:1561624. doi: 10.3389/fmicb.2025.1561624. eCollection 2025.

Abstract

This study isolated a strain, K1134, from the sputum of an ICU patient, revealing its resistance to the carbapenem antibiotics meropenem and imipenem. Whole-genome sequencing identified a plasmid pK1134-KPC, which carries the carbapenem resistance gene . pK1134-KPC, belonging to the IncFII plasmid group, exhibits a modular structure with embedded in a 32.09 kb accessory region containing multiple accessory genetic elements (AGEs). Comparative genomic analysis of 48 isolates from 12 countries showed high genetic diversity, with strains clustered into three clades. Notably, harbors extensive antimicrobial resistance genes across diverse AGEs, classifying it as multidrug-resistant. Twelve -carrying AGEs were identified from the sequences of the isolates, classified into two groups: Tn and Tn-related elements. The gene clusters for enterotoxins tilimycin and tilivalline, encompassing key regulators and operons, were present in nearly all strains, with incomplete clusters exclusively observed in clade 3 isolates. This study underscores the global dissemination and genetic adaptability of , highlighting its potential role as a reservoir for resistance genes and emphasizing the need for robust surveillance to mitigate its public health impact.

摘要

本研究从一名重症监护病房(ICU)患者的痰液中分离出一株菌株K1134,发现其对碳青霉烯类抗生素美罗培南和亚胺培南具有耐药性。全基因组测序鉴定出一个携带碳青霉烯耐药基因的质粒pK1134-KPC。pK1134-KPC属于IncFII质粒组,具有模块化结构,其中[基因名称]嵌入在一个包含多个辅助遗传元件(AGEs)的32.09 kb辅助区域中。对来自12个国家的48株[菌株名称]分离株进行的比较基因组分析显示,其具有高度的遗传多样性,菌株聚为三个进化枝。值得注意的是,[菌株名称]在不同的AGEs中含有广泛的抗菌耐药基因,将其归类为多重耐药菌。从分离株序列中鉴定出12个携带[基因名称]的AGEs,分为两组:Tn和Tn相关元件。几乎所有菌株中都存在包含关键调节因子和操纵子的肠毒素tilimycin和tilivalline基因簇,仅在进化枝3分离株中观察到不完整的基因簇。本研究强调了[菌株名称]的全球传播和遗传适应性,突出了其作为耐药基因储存库的潜在作用,并强调需要进行有力监测以减轻其对公共卫生的影响。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6492/11955625/d3099574590c/fmicb-16-1561624-g001.jpg

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