• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

从各种与水相关的环境中分离出的三个新细菌物种,即黄玫瑰色杆菌新种、沼泽玫瑰色杆菌新种和亲水玫瑰色杆菌新种。

Three Novel Bacterial Species, Roseateles flavus sp. nov., Roseateles paludis sp. nov., and Roseateles hydrophilus sp. nov., Isolated from Various Water-Related Environments.

作者信息

Woo Haejin, Chhetri Geeta, Kim Inhyup, Park Sunho, Lee Hyunji, Yook Subin, Seo Taegun

机构信息

Department of Life Science, Dongguk University-Seoul, Goyang, 10326, Republic of Korea.

出版信息

Curr Microbiol. 2025 Apr 2;82(5):226. doi: 10.1007/s00284-025-04209-x.

DOI:10.1007/s00284-025-04209-x
PMID:40175599
Abstract

A polyphasic study was conducted to determine the taxonomic positions of three bacterial strains, designated as strains 2.12, DJS-2-20, and UHG3, isolated from the water of an agricultural water pipe, wetland, and artificial lake, respectively. These strains were Gram-stain-negative, rod-shaped, and oxidase positive. The fatty acid profiles of all three strains revealed that the major fatty acids (> 10%) were C and summed features 3 (comprising Cω6c and/or Cω7c), with strain UHG3 additionally featuring C 3-OH as its main fatty acid. Phosphatidylethanolamine was the major polar lipid. Ubiquinone 8 (Q-8) was the only respiratory quinone detected. The genomic G + C contents were 68.5% for strain 2.12, 68% for strain DJS-2-20, and 69% for strain UHG3. Strains 2.12, DJS-2-20, and UHG3 had the closest 16S rRNA gene sequence similarity with R. subflavus APW6 (98.5%), R. puraquae CCUG 52769 (98.2%), and R. puraquae CCUG 52769 (99.4%), respectively. The pairwise amino acid identity, average nucleotide identity, and digital DNA-DNA hybridization values for strains 2.12, DJS-2-20, and UHG3 with its closely related type strain of the species were below the species delineation thresholds. The genotypic and phenotypic characteristics observed in this study indicated that strains 2.12 (= KACC 23730 = TBRC 19013), DJS-2-20 (= KACC 23731 = TBRC 19014), and UHG3 (= KACC 22636 = TBRC 16347) represent three novel Roseateles species, for which we propose the names Roseateles flavus sp. nov., Roseateles paludis sp. nov., and Roseateles hydrophilus sp. nov., respectively.

摘要

开展了一项多相研究,以确定分别从农用水管水、湿地和人工湖分离出的三株细菌(命名为菌株2.12、DJS-2-20和UHG3)的分类地位。这些菌株革兰氏染色阴性、杆状且氧化酶阳性。所有三株菌株的脂肪酸谱显示,主要脂肪酸(>10%)为C和总和特征3(包含Cω6c和/或Cω7c),菌株UHG3另外以C 3-OH作为其主要脂肪酸。磷脂酰乙醇胺是主要的极性脂质。泛醌8(Q-8)是检测到的唯一呼吸醌。菌株2.12的基因组G+C含量为68.5%,菌株DJS-2-20为68%,菌株UHG3为69%。菌株2.12、DJS-2-20和UHG3与微黄玫瑰色杆菌APW6(98.5%)、水生玫瑰色杆菌CCUG 52769(98.2%)和水生玫瑰色杆菌CCUG 52769(99.4%)的16S rRNA基因序列相似度最高。菌株2.12、DJS-2-20和UHG3与其密切相关的该物种模式菌株的成对氨基酸同一性、平均核苷酸同一性和数字DNA-DNA杂交值均低于物种界定阈值。本研究中观察到的基因型和表型特征表明,菌株2.12(=KACC 23730=TBRC 19013)、DJS-2-20(=KACC 23731=TBRC 19014)和UHG3(=KACC 22636=TBRC 16347)代表三个新的玫瑰色杆菌属物种,我们分别将其命名为微黄玫瑰色杆菌新种、沼泽玫瑰色杆菌新种和嗜水玫瑰色杆菌新种。

相似文献

1
Three Novel Bacterial Species, Roseateles flavus sp. nov., Roseateles paludis sp. nov., and Roseateles hydrophilus sp. nov., Isolated from Various Water-Related Environments.从各种与水相关的环境中分离出的三个新细菌物种,即黄玫瑰色杆菌新种、沼泽玫瑰色杆菌新种和亲水玫瑰色杆菌新种。
Curr Microbiol. 2025 Apr 2;82(5):226. doi: 10.1007/s00284-025-04209-x.
2
sp. nov. and sp. nov., isolated from artificial pond water and sp. nov., isolated from a root.新种和新种,分别从人工池塘水和根中分离得到。
Int J Syst Evol Microbiol. 2024 Jun;74(6). doi: 10.1099/ijsem.0.006426.
3
Roseateles caseinilyticus sp. nov. and Roseateles cellulosilyticus sp. nov., isolated from rice paddy field soil.玫瑰色射电杆菌新种和纤维素分解玫瑰色射电杆菌新种,从稻田土壤中分离得到。
Antonie Van Leeuwenhoek. 2024 Jun 4;117(1):87. doi: 10.1007/s10482-024-01988-4.
4
sp. nov., sp. nov., sp. nov., sp. nov., sp. nov., sp. nov., sp. nov. and sp. nov., isolated from streams in China.新种,新种,新种,新种,新种,新种,新种和新种,从中国的溪流中分离得到。
Int J Syst Evol Microbiol. 2025 Mar;75(3). doi: 10.1099/ijsem.0.006707.
5
sp. nov. and sp. nov., isolated from marine red algae.新种和新种,从海洋红藻中分离得到。
Int J Syst Evol Microbiol. 2024 Nov;74(11). doi: 10.1099/ijsem.0.006574.
6
sp. nov., sp. nov. and sp. nov., isolated from freshwater at Jucheon River, and emended description of comb. nov.新种,新种和新种,从全州川的淡水中分离得到,并修订了组合新种的描述。
Int J Syst Evol Microbiol. 2023 Sep;73(9). doi: 10.1099/ijsem.0.006043.
7
Isolation and characterization of sp. nov. and sp. nov. isolated from freshwater.从淡水中分离出的[具体菌种1]新种和[具体菌种2]新种的分离与鉴定
Int J Syst Evol Microbiol. 2025 Feb;75(2). doi: 10.1099/ijsem.0.006688.
8
Roseovarius tibetensis sp. nov., a halophilic bacterium isolated from Lake LongmuCo on Tibetan Plateau.西藏高原龙木错湖中分离到的一株嗜盐菌 Roseovarius tibetensis sp. nov.
J Microbiol. 2018 Nov;56(11):783-789. doi: 10.1007/s12275-018-8178-0. Epub 2018 Oct 24.
9
Roseateles microcysteis sp. nov., Isolated from Co-cultivation of Microcystis aeruginosa and Myriophyllum spicatum.玫瑰色微囊藻新种,从铜绿微囊藻和竹叶眼子菜共培养物中分离得到。
Curr Microbiol. 2024 Nov 26;82(1):11. doi: 10.1007/s00284-024-04002-2.
10
sp. nov., isolated from a freshwater lake.sp. nov.,分离自一个淡水湖。
Int J Syst Evol Microbiol. 2020 Sep;70(9):4942-4950. doi: 10.1099/ijsem.0.004363. Epub 2020 Aug 4.

本文引用的文献

1
antiSMASH 7.0: new and improved predictions for detection, regulation, chemical structures and visualisation.antiSMASH 7.0:用于检测、调控、化学结构和可视化的全新且改进的预测功能。
Nucleic Acids Res. 2023 Jul 5;51(W1):W46-W50. doi: 10.1093/nar/gkad344.
2
OrthoVenn3: an integrated platform for exploring and visualizing orthologous data across genomes.OrthoVenn3:一个用于跨基因组探索和可视化同源数据的集成平台。
Nucleic Acids Res. 2023 Jul 5;51(W1):W397-W403. doi: 10.1093/nar/gkad313.
3
Genome-based taxonomic classification of the closest-to-Comamonadaceae group supports a new family Sphaerotilaceae fam. nov. and taxonomic revisions.
基于基因组的最接近丛毛单胞菌科群的分类学分类支持一个新的科 Sphaerotilaceae 科。nov. 和分类修订。
Syst Appl Microbiol. 2022 Nov;45(6):126352. doi: 10.1016/j.syapm.2022.126352. Epub 2022 Aug 27.
4
TYGS and LPSN: a database tandem for fast and reliable genome-based classification and nomenclature of prokaryotes.TYGS 和 LPSN:用于快速可靠的基于基因组的原核生物分类和命名的数据库串联。
Nucleic Acids Res. 2022 Jan 7;50(D1):D801-D807. doi: 10.1093/nar/gkab902.
5
Introducing EzAAI: a pipeline for high throughput calculations of prokaryotic average amino acid identity.介绍 EzAAI:一种用于高通量计算原核生物平均氨基酸身份的流水线。
J Microbiol. 2021 May;59(5):476-480. doi: 10.1007/s12275-021-1154-0. Epub 2021 Apr 28.
6
RefSeq: expanding the Prokaryotic Genome Annotation Pipeline reach with protein family model curation.RefSeq:通过蛋白质家族模型编纂扩展原核生物基因组注释管道的覆盖范围。
Nucleic Acids Res. 2021 Jan 8;49(D1):D1020-D1028. doi: 10.1093/nar/gkaa1105.
7
Mitsuaria chitinivorans sp. nov. a potential candidate for bioremediation: emended description of the genera Mitsuaria, Roseateles and Pelomonas.Mitsuaria chitinivorans sp. nov. 一种有生物修复潜力的候选菌:对 Mitsuaria、Roseateles 和 Pelomonas 属的修正描述。
Arch Microbiol. 2020 Sep;202(7):1839-1848. doi: 10.1007/s00203-020-01905-z. Epub 2020 May 23.
8
MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms.MEGA X:跨越计算平台的分子进化遗传学分析。
Mol Biol Evol. 2018 Jun 1;35(6):1547-1549. doi: 10.1093/molbev/msy096.
9
Proposed minimal standards for the use of genome data for the taxonomy of prokaryotes.关于将基因组数据用于原核生物分类学的拟议最低标准。
Int J Syst Evol Microbiol. 2018 Jan;68(1):461-466. doi: 10.1099/ijsem.0.002516.
10
Mitsuaria noduli sp. nov., isolated from the root nodules of Robinia pseudoacacia in a lead-zinc mine.结节密苏里亚菌新种,从铅锌矿中刺槐的根瘤中分离得到。
Int J Syst Evol Microbiol. 2018 Jan;68(1):87-92. doi: 10.1099/ijsem.0.002459. Epub 2017 Nov 2.