Woo Haejin, Chhetri Geeta, Kim Inhyup, Park Sunho, Lee Hyunji, Yook Subin, Seo Taegun
Department of Life Science, Dongguk University-Seoul, Goyang, 10326, Republic of Korea.
Curr Microbiol. 2025 Apr 2;82(5):226. doi: 10.1007/s00284-025-04209-x.
A polyphasic study was conducted to determine the taxonomic positions of three bacterial strains, designated as strains 2.12, DJS-2-20, and UHG3, isolated from the water of an agricultural water pipe, wetland, and artificial lake, respectively. These strains were Gram-stain-negative, rod-shaped, and oxidase positive. The fatty acid profiles of all three strains revealed that the major fatty acids (> 10%) were C and summed features 3 (comprising Cω6c and/or Cω7c), with strain UHG3 additionally featuring C 3-OH as its main fatty acid. Phosphatidylethanolamine was the major polar lipid. Ubiquinone 8 (Q-8) was the only respiratory quinone detected. The genomic G + C contents were 68.5% for strain 2.12, 68% for strain DJS-2-20, and 69% for strain UHG3. Strains 2.12, DJS-2-20, and UHG3 had the closest 16S rRNA gene sequence similarity with R. subflavus APW6 (98.5%), R. puraquae CCUG 52769 (98.2%), and R. puraquae CCUG 52769 (99.4%), respectively. The pairwise amino acid identity, average nucleotide identity, and digital DNA-DNA hybridization values for strains 2.12, DJS-2-20, and UHG3 with its closely related type strain of the species were below the species delineation thresholds. The genotypic and phenotypic characteristics observed in this study indicated that strains 2.12 (= KACC 23730 = TBRC 19013), DJS-2-20 (= KACC 23731 = TBRC 19014), and UHG3 (= KACC 22636 = TBRC 16347) represent three novel Roseateles species, for which we propose the names Roseateles flavus sp. nov., Roseateles paludis sp. nov., and Roseateles hydrophilus sp. nov., respectively.
开展了一项多相研究,以确定分别从农用水管水、湿地和人工湖分离出的三株细菌(命名为菌株2.12、DJS-2-20和UHG3)的分类地位。这些菌株革兰氏染色阴性、杆状且氧化酶阳性。所有三株菌株的脂肪酸谱显示,主要脂肪酸(>10%)为C和总和特征3(包含Cω6c和/或Cω7c),菌株UHG3另外以C 3-OH作为其主要脂肪酸。磷脂酰乙醇胺是主要的极性脂质。泛醌8(Q-8)是检测到的唯一呼吸醌。菌株2.12的基因组G+C含量为68.5%,菌株DJS-2-20为68%,菌株UHG3为69%。菌株2.12、DJS-2-20和UHG3与微黄玫瑰色杆菌APW6(98.5%)、水生玫瑰色杆菌CCUG 52769(98.2%)和水生玫瑰色杆菌CCUG 52769(99.4%)的16S rRNA基因序列相似度最高。菌株2.12、DJS-2-20和UHG3与其密切相关的该物种模式菌株的成对氨基酸同一性、平均核苷酸同一性和数字DNA-DNA杂交值均低于物种界定阈值。本研究中观察到的基因型和表型特征表明,菌株2.12(=KACC 23730=TBRC 19013)、DJS-2-20(=KACC 23731=TBRC 19014)和UHG3(=KACC 22636=TBRC 16347)代表三个新的玫瑰色杆菌属物种,我们分别将其命名为微黄玫瑰色杆菌新种、沼泽玫瑰色杆菌新种和嗜水玫瑰色杆菌新种。