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选择性同位素标记探究了一种异双金属锰/铁蛋白的化学活性和反应机制。

Selective isotope labeling probes the chemical capacity and reaction mechanism of a heterobimetallic Mn/Fe protein.

作者信息

Gan Yunqiao J, Hazel Joseph M, Searle Brian C, Shafaat Hannah S

机构信息

Department of Chemistry and Biochemistry, The Ohio State University, 100 W 18th Avenue, Columbus, OH 43210, USA; Department of Chemistry and Biochemistry, University of California, Los Angeles, 607 Charles E. Young Drive East, Los Angeles, CA 90095, USA.

Department of Chemistry and Biochemistry, The Ohio State University, 100 W 18th Avenue, Columbus, OH 43210, USA.

出版信息

J Inorg Biochem. 2025 Sep;270:112933. doi: 10.1016/j.jinorgbio.2025.112933. Epub 2025 Apr 23.

DOI:10.1016/j.jinorgbio.2025.112933
PMID:40378440
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12226152/
Abstract

The R2-like ligand binding oxidase (R2lox) forms a novel tyrosine-valine crosslink upon O activation, reflecting an overall two-electron oxidation reaction. However, the mechanism through which the crosslink is formed is under debate, as the reaction can be initiated through either tyrosine OH or valine CH bond activation. Here, we utilized selective isotopic labeling and several spectroscopic techniques to probe the mechanism of this oxidation process. The results suggest that R2lox is capable of performing CH bond activation, with both solvent and CH kinetic isotope effects of approximately 2. Signatures of a high-valent Mn/Fe intermediate were observed through rapid-freeze-quench EPR that resemble an analogous intermediate found in the heterobimetallic radical-initiating enzyme, class Ic ribonucleotide reductase. This study provides a lower bound on the free energies of CH bonds that can be cleaved by Mn/Fe cofactors and suggests the potential for such enzymes to functionally replace Fe/Fe cofactors in a range of reactions.

摘要

R2样配体结合氧化酶(R2lox)在O激活时形成一种新型的酪氨酸-缬氨酸交联,这反映了一个整体的双电子氧化反应。然而,交联形成的机制仍存在争议,因为反应可以通过酪氨酸OH或缬氨酸CH键的激活来启动。在这里,我们利用选择性同位素标记和几种光谱技术来探究这种氧化过程的机制。结果表明,R2lox能够进行CH键的激活,溶剂和CH动力学同位素效应均约为2。通过快速冷冻淬灭EPR观察到高价Mn/Fe中间体的特征,类似于在异双金属自由基引发酶Ic类核糖核苷酸还原酶中发现的类似中间体。这项研究提供了可被Mn/Fe辅因子裂解的CH键自由能的下限,并表明这类酶在一系列反应中功能替代Fe/Fe辅因子的潜力。

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本文引用的文献

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Chem Sci. 2023 Dec 27;15(8):2817-2826. doi: 10.1039/d3sc04900k. eCollection 2024 Feb 22.
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Bioinformatic Discovery of a Cambialistic Monooxygenase.生物信息学发现一种居间型单加氧酶。
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Enzymatic Hydroxylation of Aliphatic C-H Bonds by a Mn/Fe Cofactor.锰铁辅因子促进的脂肪族 C-H 键的酶促羟化。
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Bond dissociation energies of X-H bonds in proteins.蛋白质中X-H键的键解离能。
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Self-sacrificial tyrosine cleavage by an Fe:Mn oxygenase for the biosynthesis of -aminobenzoate in .通过 Fe:Mn 加氧酶的自我牺牲型酪氨酸裂解作用合成 - 氨基苯甲酸酯。
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Pulsed Multifrequency Electron Paramagnetic Resonance Spectroscopy Reveals Key Branch Points for One- vs Two-Electron Reactivity in Mn/Fe Proteins.脉冲多频电子顺磁共振波谱揭示 Mn/Fe 蛋白中单电子与双电子反应的关键分支点。
J Am Chem Soc. 2022 Jul 13;144(27):11991-12006. doi: 10.1021/jacs.1c13738. Epub 2022 Jul 5.
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Resolving Oxygenation Pathways in Manganese-Catalyzed C(sp)-H Functionalization via Radical and Cationic Intermediates.通过自由基和阳离子中间体解析锰催化的 C(sp3)-H 功能化中的氧合途径。
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8
Key Structural Motifs Balance Metal Binding and Oxidative Reactivity in a Heterobimetallic Mn/Fe Protein.关键结构基序平衡异双核 Mn/Fe 蛋白中的金属结合和氧化反应性。
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