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解析真菌基因组编辑革命:病理学与生物技术应用方面

Unravelling fungal genome editing revolution: pathological and biotechnological application aspects.

作者信息

Hassane Abdallah M A, Obiedallah Marwa, Karimi Javad, Khattab Sadat M R, Hussein Hussein R, Abo-Dahab Youssef, Eltoukhy Adel, Abo-Dahab Nageh F, Abouelela Mohamed E

机构信息

Botany and Microbiology Department, Faculty of Science, Al-Azhar University, Assiut Branch, Assiut, 71524, Egypt.

Department of Botany and Microbiology, Faculty of Science, University of Sohag, Sohag, 82524, Egypt.

出版信息

Arch Microbiol. 2025 May 22;207(7):150. doi: 10.1007/s00203-025-04360-w.

Abstract

Fungi represent a broad and evolutionarily unique group within the eukaryotic domain, characterized by extensive ecological adaptability and metabolic versatility. Their inherent biological intricacy is evident in the diverse and dynamic relationships they establish with various hosts and environmental niches. Notably, fungi are integral to disease processes and a wide array of biotechnological innovations, highlighting their significance in medical, agricultural, and industrial domains. Recent advances in genetic engineering have revolutionized fungal research, with CRISPR/Cas emerging as the most potent and versatile genome editing platform. This technology enables precise manipulation of fungal genomes, from silencing efflux pump genes in Candida albicans (enhancing antifungal susceptibility) to targeting virulence-associated sirtuins in Aspergillus fumigatus (attenuating pathogenicity). Its applications span gene overexpression, multiplexed mutagenesis, and secondary metabolite induction, proving transformative for disease management and biotechnological innovation. CRISPR/Cas9's advantages-unmatched precision, cost-effectiveness, and therapeutic potential-are tempered by challenges like off-target effects, ethical dilemmas, and regulatory gaps. Integrating nanoparticle delivery systems and multi-omics approaches may overcome technical barriers, but responsible innovation requires addressing these limitations. CRISPR-driven fungal genome editing promises to redefine solutions for drug-resistant infections, sustainable bioproduction, and beyond as the field evolves. In conclusion, genome editing technologies have enhanced our capacity to dissect fungal biology and expanded fungi's practical applications across various scientific and industrial domains. Continued innovation in this field promises to unlock the vast potential of fungal systems further, enabling more profound understanding and transformative biotechnological progress.

摘要

真菌是真核生物域中一个广泛且在进化上独特的群体,其特点是具有广泛的生态适应性和代谢多样性。它们内在的生物学复杂性在与各种宿主和环境生态位建立的多样且动态的关系中显而易见。值得注意的是,真菌在疾病过程以及众多生物技术创新中不可或缺,突显了它们在医学、农业和工业领域的重要性。基因工程的最新进展彻底改变了真菌研究,CRISPR/Cas成为最强大且用途最广泛的基因组编辑平台。这项技术能够精确操纵真菌基因组,从沉默白色念珠菌中的外排泵基因(增强抗真菌敏感性)到靶向烟曲霉中与毒力相关的沉默调节蛋白(减弱致病性)。其应用涵盖基因过表达、多重诱变和次级代谢产物诱导,事实证明对疾病管理和生物技术创新具有变革性。CRISPR/Cas9的优势——无与伦比的精准性、成本效益和治疗潜力——因脱靶效应、伦理困境和监管空白等挑战而受到影响。整合纳米颗粒递送系统和多组学方法可能会克服技术障碍,但负责任的创新需要解决这些限制。随着该领域的发展,CRISPR驱动的真菌基因组编辑有望重新定义针对耐药感染、可持续生物生产等问题的解决方案。总之,基因组编辑技术增强了我们剖析真菌生物学的能力,并扩大了真菌在各个科学和工业领域的实际应用。该领域的持续创新有望进一步释放真菌系统的巨大潜力,实现更深入的理解和变革性的生物技术进步。

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