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通过图像分割实时检测脑膜瘤:一种基于深度迁移学习的卷积神经网络方法。

Real-Time Detection of Meningiomas by Image Segmentation: A Very Deep Transfer Learning Convolutional Neural Network Approach.

作者信息

Das Debasmita, Sarkar Chayna, Das Biswadeep

机构信息

Department of Computer Science and Engineering, Vellore Institute of Technology, Vellore Campus, Tiruvalam Road, Katpadi, Vellore 632014, Tamil Nadu, India.

Department of Clinical Pharmacology and Therapeutics, North Eastern Indira Gandhi Regional Institute of Health and Medical Sciences (NEIGRIHMS), Mawdiangdiang, Shillong 793018, Meghalaya, India.

出版信息

Tomography. 2025 Apr 24;11(5):50. doi: 10.3390/tomography11050050.

Abstract

BACKGROUND/OBJECTIVES: Developing a treatment strategy that effectively prolongs the lives of people with brain tumors requires an accurate diagnosis of the condition. Therefore, improving the preoperative classification of meningiomas is a priority. Machine learning (ML) has made great strides thanks to the development of convolutional neural networks (CNNs) and computer-aided tumor detection systems. The deep convolutional layers automatically extract important and dependable information from the input space, in contrast to more traditional neural network layers. One recent and promising advancement in this field is ML. Still, there is a dearth of studies being carried out in this area.

METHODS

Therefore, starting with the analysis of magnetic resonance images, we have suggested in this research work a tried-and-tested and methodical strategy for real-time meningioma diagnosis by image segmentation using a very deep transfer learning CNN model or DNN model (VGG-16) with CUDA. Since the VGGNet CNN model has a greater level of accuracy than other deep CNN models like AlexNet, GoogleNet, etc., we have chosen to employ it. The VGG network that we have constructed with very small convolutional filters consists of 13 convolutional layers and 3 fully connected layers. Our VGGNet model takes in an sMRI FLAIR image input. The VGG's convolutional layers leverage a minimal receptive field, i.e., 3 × 3, the smallest possible size that still captures up/down and left/right. Moreover, there are also 1 × 1 convolution filters acting as a linear transformation of the input. This is followed by a ReLU unit. The convolution stride is fixed at 1 pixel to keep the spatial resolution preserved after convolution. All the hidden layers in our VGG network also use ReLU. A dataset consisting of 264 3D FLAIR sMRI image segments from three different classes (meningioma, tuberculoma, and normal) was employed. The number of epochs in the Sequential Model was set to 10. The Keras layers that we used were Dense, Dropout, Flatten, Batch Normalization, and ReLU.

RESULTS

According to the simulation findings, our suggested model successfully classified all of the data in the dataset used, with a 99.0% overall accuracy. The performance metrics of the implemented model and confusion matrix for tumor classification indicate the model's high accuracy in brain tumor classification.

CONCLUSIONS

The good outcomes demonstrate the possibility of our suggested method as a useful diagnostic tool, promoting better understanding, a prognostic tool for clinical outcomes, and an efficient brain tumor treatment planning tool. It was demonstrated that several performance metrics we computed using the confusion matrix of the previously used model were very good. Consequently, we think that the approach we have suggested is an important way to identify brain tumors.

摘要

背景/目的:制定一种有效延长脑肿瘤患者生命的治疗策略需要对病情进行准确诊断。因此,改进脑膜瘤的术前分类是当务之急。由于卷积神经网络(CNN)和计算机辅助肿瘤检测系统的发展,机器学习(ML)取得了长足进步。与更传统的神经网络层相比,深度卷积层能自动从输入空间中提取重要且可靠的信息。该领域最近一项有前景的进展是机器学习。不过,这一领域的研究仍很匮乏。

方法

因此,从磁共振图像分析入手,我们在本研究工作中提出了一种经过验证且系统的策略,通过使用具有CUDA的非常深的迁移学习CNN模型或DNN模型(VGG-16)进行图像分割来实时诊断脑膜瘤。由于VGGNet CNN模型比AlexNet、GoogleNet等其他深度CNN模型具有更高的准确率,我们选择使用它。我们构建的具有非常小的卷积滤波器的VGG网络由13个卷积层和3个全连接层组成。我们的VGGNet模型接收sMRI FLAIR图像输入。VGG的卷积层利用最小感受野,即3×3,这是仍能捕捉上下和左右信息的最小可能尺寸。此外,还有1×1卷积滤波器作为输入的线性变换。随后是ReLU单元。卷积步长固定为1像素,以保持卷积后空间分辨率不变。我们VGG网络中的所有隐藏层也使用ReLU。使用了一个由来自三个不同类别(脑膜瘤、结核瘤和正常)的264个3D FLAIR sMRI图像片段组成的数据集。顺序模型中的轮次设置为10。我们使用的Keras层有密集层、随机失活层、展平层、批量归一化层和ReLU。

结果

根据模拟结果,我们提出的模型成功对所用数据集中的所有数据进行了分类,总体准确率为99.0%。实施模型的性能指标和肿瘤分类的混淆矩阵表明该模型在脑肿瘤分类中具有很高的准确率。

结论

良好的结果表明我们提出的方法有可能成为一种有用的诊断工具,有助于更好地理解病情,作为临床结果的预后工具,以及高效的脑肿瘤治疗规划工具。结果表明,我们使用先前模型的混淆矩阵计算的几个性能指标非常好。因此,我们认为我们提出的方法是识别脑肿瘤的重要途径。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d60b/12115478/3005cd7ecdbb/tomography-11-00050-g001.jpg

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