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蛋白质组学癌症诊断中作为生物标志物指标的分析技术

Analytical Techniques as Indicators of Biomarkers in Proteomics Cancer Diagnosis.

作者信息

Goswami Pawan Kumar, Kumar Ranjeet, Kumar Dharmendra, Dhiman Shubham

机构信息

Narayan Institute of Pharmacy, Gopal Narayan Singh University, Sasaram, Rohtas, Bihar, 821305, India.

Department of Pharmaceutical Analysis, National Institute of Pharmaceutical Education And Research, Hajipur, Bihar, 844102, India.

出版信息

Anticancer Agents Med Chem. 2025 May 29. doi: 10.2174/0118715206377391250526054417.

DOI:10.2174/0118715206377391250526054417
PMID:40454503
Abstract

BACKGROUND

Cancer is a complex disease marked by changes in the levels and functions of key cellular proteins, including oncogenes and tumor suppressors. Proteomics technology enables the identification of crucial protein targets and signaling pathways involved in cancer cell proliferation and metastasis. Various proteomics techniques have been employed to investigate the molecular mechanisms of cancer, aiding in the confirmation and characterization of heritable disorders.

METHOD

A comprehensive literature search was conducted using PubMed, ScienceDirect, and Google Scholar with search terms like "Cancer and proteomics" and "Mass spectrometry in oncology," utilizing Boolean operators for refinement. Selection criteria included peer-reviewed articles in English on MS-based biomarker detection, tumor-specific proteins, and drug resistance markers, excluding non-peer-reviewed works and pre-2000 publications unless foundational. Extracted data focused on MS methodologies, biomarker sensitivity, and clinical applications, particularly advances in detecting low-abundance biomarkers and monitoring treatment response. Methodological quality was assessed using PRISMA, evaluating study design, sample size, reproducibility, and statistical analysis. Ethical approval was not required, but adherence to systematic review guidelines and proper citation were ensured.

RESULT

In this review, we highlighted the advanced analytical technique for cancer diagnosis and management of cancer, and described the objective of novel cancer biomarkers. Mass spectrometry (MS) is transforming cancer diagnostics and personalized medicine by enabling precise biomarker detection and monitoring. Unlike traditional antibody-based methods, MS provides high-throughput, quantitative analysis of tumor-specific proteins in clinical samples like blood and tissue. Advanced MS techniques improve sensitivity, allowing for the identification of low-abundance biomarkers and tumor-associated proteoforms, including post-translational modifications and drug resistance markers. In research, MS-based proteomics supports multi-center biomarker validation studies with standardized protocols, enhancing reproducibility. The integration of proteomic data with genomic and transcriptomic datasets through proteogenomics is refining precision oncology strategies. These advancements are bridging the gap between research and clinical application, making MS a critical tool for early cancer detection, prognosis, and therapy selection.

CONCLUSION

Advancements in technology and analytical techniques have helped to produce more accurate and sensitive cancer-specific biomarkers. These methods are advancing rapidly, and developing high-throughput platforms has yielded great results. However, The substantial variation in protein concentrations makes cancer protein profiling extremely complicated. This shows that more technical developments are required in the future to improve proteome broad screening of cancer cells.

摘要

背景

癌症是一种复杂的疾病,其特征在于关键细胞蛋白(包括癌基因和肿瘤抑制因子)的水平和功能发生变化。蛋白质组学技术能够识别参与癌细胞增殖和转移的关键蛋白质靶点及信号通路。已采用各种蛋白质组学技术来研究癌症的分子机制,有助于确认和表征遗传性疾病。

方法

使用PubMed、ScienceDirect和谷歌学术进行全面的文献检索,检索词如“癌症与蛋白质组学”和“肿瘤学中的质谱分析”,利用布尔运算符进行精确筛选。选择标准包括以英文发表的关于基于质谱的生物标志物检测、肿瘤特异性蛋白和耐药标志物的同行评审文章,不包括非同行评审作品和2000年以前的出版物,除非是基础性的。提取的数据集中在质谱方法、生物标志物敏感性和临床应用,特别是在检测低丰度生物标志物和监测治疗反应方面的进展。使用PRISMA评估方法学质量,评估研究设计、样本量、可重复性和统计分析。无需伦理批准,但确保遵循系统评价指南并正确引用。

结果

在本综述中,我们强调了用于癌症诊断和管理的先进分析技术,并描述了新型癌症生物标志物的目标。质谱分析(MS)通过实现精确的生物标志物检测和监测,正在改变癌症诊断和个性化医疗。与传统的基于抗体的方法不同,MS可对血液和组织等临床样本中的肿瘤特异性蛋白进行高通量、定量分析。先进的MS技术提高了灵敏度,能够识别低丰度生物标志物和肿瘤相关蛋白形式,包括翻译后修饰和耐药标志物。在研究中,基于MS的蛋白质组学支持采用标准化方案的多中心生物标志物验证研究,提高了可重复性。通过蛋白质基因组学将蛋白质组学数据与基因组和转录组数据集整合,正在完善精准肿瘤学策略。这些进展正在弥合研究与临床应用之间的差距,使MS成为早期癌症检测、预后和治疗选择的关键工具。

结论

技术和分析技术的进步有助于产生更准确、更敏感的癌症特异性生物标志物。这些方法正在迅速发展,开发高通量平台已取得了巨大成果。然而,蛋白质浓度的巨大差异使得癌症蛋白质谱分析极其复杂。这表明未来需要更多的技术发展来改善对癌细胞蛋白质组的广泛筛查。

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