Miotti Pietro, Scarpone Matteo, Lim Chwee Teck, Pivkin Igor V
Institute of Computing, Faculty of Informatics, Università della Svizzera italiana, Lugano, Switzerland.
Swiss Institute of Bioinformatics, Lausanne, Switzerland.
Ann Biomed Eng. 2025 Jun 19. doi: 10.1007/s10439-025-03772-5.
Modeling eukaryotic cell flow in microfluidic devices and capillary networks can be instrumental in assessing how cell mechanics influence its behavior. Due to the viscoelastic characteristics of cells and their capacity for substantial deformation, models that are both detailed and computationally efficient are necessary to explore cell rheology. We present a coarse-grained model for simulating the mechanics of eukaryotic cells in flow, with a focus on the modeling of cell membrane, nucleus, and cytoskeleton.
The cell and nucleus membranes are represented using surface triangulation, capturing both viscous and elastic properties of the membranes. To maintain computational efficiency while retaining the ability to reproduce the viscoelastic behavior of the entire cell, the complexity of the cytoskeleton model is reduced through the use of the viscoelastic bonds. Dissipative Particle Dynamics is employed to facilitate flow simulations; however, the model is suitable for use in many existing continuum and particle-based methods.
The cell model is calibrated and validated using experimental data from micropipette aspiration and microfluidic experiments involving breast epithelial cells (MCF-10A).
We believe the balance between simplicity and accuracy makes the proposed model a valuable tool for simulating eukaryotic cell mechanics in flow, enabling faster simulations, while also simplifying the parameterization procedure.
对微流控装置和毛细血管网络中的真核细胞流动进行建模,有助于评估细胞力学如何影响其行为。由于细胞的粘弹性特征及其显著变形的能力,需要详细且计算高效的模型来探索细胞流变学。我们提出了一种粗粒度模型,用于模拟流动中真核细胞的力学,重点是细胞膜、细胞核和细胞骨架的建模。
使用表面三角剖分来表示细胞和细胞核膜,捕捉膜的粘性和弹性特性。为了在保持计算效率的同时保留再现整个细胞粘弹性行为的能力,通过使用粘弹性键来降低细胞骨架模型的复杂性。采用耗散粒子动力学来促进流动模拟;然而,该模型适用于许多现有的连续介质和基于粒子的方法。
使用来自微吸管抽吸和涉及乳腺上皮细胞(MCF - 10A)的微流控实验的实验数据对细胞模型进行校准和验证。
我们认为简单性和准确性之间的平衡使所提出的模型成为模拟流动中真核细胞力学的有价值工具,能够实现更快的模拟,同时还简化了参数化过程。