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提高多发性硬化症病变分割的精度:一种基于U-net并采用数据增强的机器学习方法。

Enhancing precision in multiple sclerosis lesion segmentation: A U-net based machine learning approach with data augmentation.

作者信息

Cetin Oezdemir, Canel Berkay, Dogali Gamze, Sakoglu Unal

机构信息

Department of Electrical Engineering and Information Technology, Technische Universität Darmstadt, Darmstadt, Germany.

Computer Engineering, University of Houston - Clear Lake, Houston, TX, USA.

出版信息

Neuroimage Rep. 2025 Feb 1;5(1):100235. doi: 10.1016/j.ynirp.2025.100235. eCollection 2025 Mar.

DOI:10.1016/j.ynirp.2025.100235
PMID:40567895
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12172712/
Abstract

Segmentation of Multiple Sclerosis (MS) lesions from Magnetic Resonance Imaging (MRI) data presents a significant challenge due to the necessity for large volumes of training data and a sophisticated training process. Traditional MRI datasets often lack the extensive sample sizes required for effective training, necessitating the exploration of alternative methods for accurate segmentation. This study proposes a robust machine learning algorithm designed to identify MS lesions using both single-modal and multi-modal MRI data. The proposed algorithm employs Convolutional Neural Networks (CNNs) in the form of U-Net architecture, a renowned model for biomedical image segmentation. To address the issue of insufficient training data, data augmentation techniques have been implemented, enhancing the diversity and volume of the training set. The dataset for this study was created from MRI data of 20 subjects. The algorithm's effectiveness was evaluated using the DSC score, a statistical tool that measures the similarity between two samples. The model achieved a DSC score of 0.7960 in the training set and 0.7912 in the test set, demonstrating its effectiveness in performing segmentation of MS from multi-modal MRI data. The predicted locations of MS lesions were compared with the corresponding layers of white matter, gray matter, and cerebrospinal fluid within the brain. This innovative approach aims to enhance the accuracy and efficiency of MS lesion segmentation, contributing to advancements in precision medicine and the overall understanding of MS.

摘要

从磁共振成像(MRI)数据中分割多发性硬化症(MS)病变是一项重大挑战,因为需要大量训练数据和复杂的训练过程。传统的MRI数据集通常缺乏有效训练所需的大量样本,因此有必要探索其他准确分割的方法。本研究提出了一种强大的机器学习算法,旨在使用单模态和多模态MRI数据识别MS病变。所提出的算法采用U-Net架构形式的卷积神经网络(CNN),这是一种用于生物医学图像分割的著名模型。为了解决训练数据不足的问题,实施了数据增强技术,增加了训练集的多样性和数量。本研究的数据集由20名受试者的MRI数据创建。使用DSC评分评估算法的有效性,DSC评分是一种测量两个样本之间相似性的统计工具。该模型在训练集中的DSC评分为0.7960,在测试集中为0.7912,证明了其在从多模态MRI数据中进行MS分割方面的有效性。将MS病变的预测位置与脑内白质、灰质和脑脊液的相应层进行了比较。这种创新方法旨在提高MS病变分割的准确性和效率,推动精准医学的发展以及对MS的整体理解。

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