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小麦中L型凝集素受体样激酶(L-LecRLK)基因的全基因组综合表征及其对非生物胁迫的响应

Comprehensive Genome-Wide Characterization of L-Type Lectin Receptor-like Kinase (L-LecRLK) Genes in Wheat ( L.) and Their Response to Abiotic Stress.

作者信息

Zhao Wan, Zhang Fuyan, Wang Jiahuan, Fang Shuai, Cheng Zhongjie, Ma Xuhui, Fan Jialin, Xu Zhaoshi, Chen Xiaojie

机构信息

Institute of Chemistry, Henan Academy of Sciences, Zhengzhou 450002, China.

Isotope Institute Co., Ltd., Henan Academy of Sciences/Henan Key Laboratory of Nuclear Agricultural Sciences, Zhengzhou 450015, China.

出版信息

Plants (Basel). 2025 Jun 19;14(12):1884. doi: 10.3390/plants14121884.

Abstract

L-type lectin receptor-like kinases (L-LecRLKs) play key roles in plant responses to environmental stresses and the regulation of growth and development. However, comprehensive studies of the L-LecRLK gene family in wheat ( L.) are still limited. In this study, 248 L-LecRLK candidate genes were identified in wheat, which is the largest number reported in any species to date. Phylogenetic analysis grouped these genes into four clades (I-IV), with Group IV exhibiting significant monocot-specific expansion. Gene duplication analysis revealed that both whole-genome/segmental and tandem duplications contributed to family expansion, while Ka/Ks ratio analysis suggested that the genes have undergone strong purifying selection. The genes displayed diverse exon-intron structures and conserved motif compositions. Promoter analysis revealed a -element associated with hormone signaling and abiotic stress responses. Transcriptome profiling showed that exhibit tissue- and stage-specific expression patterns. RNA-Seq data revealed that, under drought and heat stress conditions, and exhibited synergistic expression patterns, whereas demonstrated antagonistic expression. A qRT-PCR further demonstrated that six may function through ABA-independent regulatory mechanisms. These findings provide valuable gene candidates for stress-resistant wheat breeding and shed light on the evolution and functional diversity of L-LecRLKs in plants.

摘要

L型凝集素受体样激酶(L-LecRLKs)在植物对环境胁迫的响应以及生长发育的调控中发挥着关键作用。然而,对小麦(Triticum aestivum L.)中L-LecRLK基因家族的全面研究仍然有限。在本研究中,从小麦中鉴定出248个L-LecRLK候选基因,这是迄今为止在任何物种中报道的最大数量。系统发育分析将这些基因分为四个进化枝(I-IV),其中进化枝IV表现出显著的单子叶植物特异性扩张。基因复制分析表明,全基因组/片段重复和串联重复都对该家族的扩张有贡献,而Ka/Ks比率分析表明这些基因经历了强烈的纯化选择。这些基因表现出多样的外显子-内含子结构和保守的基序组成。启动子分析揭示了一个与激素信号传导和非生物胁迫响应相关的元件。转录组分析表明,这些基因呈现出组织和阶段特异性的表达模式。RNA-Seq数据显示,在干旱和热胁迫条件下,TaLecRLK1和TaLecRLK2呈现协同表达模式,而TaLecRLK3表现出拮抗表达。qRT-PCR进一步证明,六个TaLecRLK基因可能通过不依赖脱落酸的调控机制发挥作用。这些发现为抗逆小麦育种提供了有价值的基因候选,并阐明了植物中L-LecRLKs的进化和功能多样性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a4e3/12196811/9237d8393c5d/plants-14-01884-g001.jpg

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