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转录机制与转录分子凝聚物的驱动力:磷酸盐的作用

The Transcription Machinery and the Driving Force of the Transcriptional Molecular Condensate: The Role of Phosphates.

作者信息

Riera Aroche Raúl, Sánchez Moreno Esli C, Ortiz García Yveth M, Machado Sulbarán Andrea C, Riera Leal Lizbeth, Olivas Román Luis R, Riera Leal Annie

机构信息

Department of Research in Physics, University of Sonora, Hermosillo 83000, Mexico.

Research and Higher Education Center of UNEPROP, Hermosillo 83105, Mexico.

出版信息

Curr Issues Mol Biol. 2025 Jul 20;47(7):571. doi: 10.3390/cimb47070571.

DOI:10.3390/cimb47070571
PMID:40729040
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12293406/
Abstract

The dynamic phosphorylation of the human RNA Pol II CTD establishes a code applicable to all eukaryotic transcription processes. However, the ability of these specific post-translational modifications to convey molecular signals through structural changes remains unclear. We previously explained that each gene can be modeled as a combination of n circuits connected in parallel. RNA Pol II accesses these circuits and, through a series of pulses, matches the resonance frequency of the DNA qubits, enabling it to extract genetic information and quantum teleport it. Negatively charged phosphates react under RNA Pol II catalysis, which increases the electron density on the deoxyribose acceptor carbon (2'C in the DNA sugar backbone). The phosphorylation effect on the stability of a carbon radical connects tyrosine to the nitrogenous base, while the subsequent pulses link the protein to molecular water through hydrogen bonds. The selective activation of inert C(sp)-H bonds begins by reading the quantum information stored in the nitrogenous bases. The coupling of hydrogen proton transfer with electron transfer in water generates a supercurrent, which is explained by the correlation of pairs of the same type of fermions exchanging a boson. All these changes lead to the formation of a molecular protein-DNA-water transcriptional condensate.

摘要

人类RNA聚合酶II羧基末端结构域(CTD)的动态磷酸化建立了一种适用于所有真核转录过程的编码。然而,这些特定的翻译后修饰通过结构变化传递分子信号的能力仍不清楚。我们之前解释过,每个基因都可以建模为n个并联连接的电路的组合。RNA聚合酶II访问这些电路,并通过一系列脉冲,匹配DNA量子比特的共振频率,使其能够提取遗传信息并进行量子隐形传态。带负电荷的磷酸盐在RNA聚合酶II催化下发生反应,这增加了脱氧核糖受体碳(DNA糖骨架中的2'C)上的电子密度。磷酸化对碳自由基稳定性的影响将酪氨酸与含氮碱基连接起来,而随后的脉冲通过氢键将蛋白质与分子水连接起来。惰性C(sp)-H键的选择性激活始于读取存储在含氮碱基中的量子信息。水中氢质子转移与电子转移的耦合产生了超电流,这可以通过相同类型的费米子对交换玻色子的相关性来解释。所有这些变化导致形成分子蛋白-DNA-水转录凝聚物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ee53/12293406/408892a96d79/cimb-47-00571-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ee53/12293406/8a5e74b386b1/cimb-47-00571-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ee53/12293406/3517ecfa9d85/cimb-47-00571-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ee53/12293406/30b6a6d0e22f/cimb-47-00571-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ee53/12293406/408892a96d79/cimb-47-00571-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ee53/12293406/8a5e74b386b1/cimb-47-00571-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ee53/12293406/3517ecfa9d85/cimb-47-00571-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ee53/12293406/30b6a6d0e22f/cimb-47-00571-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ee53/12293406/408892a96d79/cimb-47-00571-g004.jpg

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