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通过使用机器学习模型预测负载能力和细胞活力对用于药物应用的金属有机框架进行理论分析。

Theoretical analysis of MOFs for pharmaceutical applications by using machine learning models to predict loading capacity and cell viability.

作者信息

Huwaimel Bader, Alqarni Saad

机构信息

Department of Pharmaceutical Chemistry, College of Pharmacy, University of Ha'il, Ha'il, 55473, Saudi Arabia.

Medical and Diagnostic Research Center, University of Ha'il, Hail, 55473, Saudi Arabia.

出版信息

Sci Rep. 2025 Aug 13;15(1):29680. doi: 10.1038/s41598-025-15879-9.

Abstract

Metal organic frameworks (MOFs) have indicated great capacity and applications in drug delivery owing to their porous structures. Analysis of their drug loading capacity as well as cytotoxicity was carried out in this study via machine learning. The study employs a stacking regression approach to predict two critical outputs: Cell Viability (%) and Drug Loading Capacity (g/g) in MOFs. The proposed framework combines base models, including Multilayer Perceptron (MLP), Random Forest (RF), and Quantile Regression (QR), with a meta-model for enhanced accuracy and robustness. Principal Component Analysis (PCA) was applied to reduce dimensionality, and the Water Cycle Algorithm was used to optimize hyperparameters. Evaluation metrics, including R, Root Mean Squared Error (RMSE), and maximum error, indicated that the QR-MLP model outperformed the other models, achieving test R scores of 0.99917 for Drug Loading Capacity and 0.99111 for Cell Viability. These findings provide a new perspective of their chemical and biological uses since they show the efficiency of stacking ensemble approaches in handling challenging datasets and optimizing MOF-based drug delivery systems. Future work will focus on enhancing biocompatibility and optimizing drug release profiles to further improve the clinical applicability of MOF-based delivery systems.

摘要

金属有机框架材料(MOFs)因其多孔结构在药物递送方面展现出巨大的潜力和应用前景。本研究通过机器学习对其载药量和细胞毒性进行了分析。该研究采用堆叠回归方法来预测两个关键输出:MOFs中的细胞活力(%)和载药量(g/g)。所提出的框架将包括多层感知器(MLP)、随机森林(RF)和分位数回归(QR)在内的基础模型与一个元模型相结合,以提高准确性和鲁棒性。应用主成分分析(PCA)进行降维,并使用水循环算法优化超参数。包括R、均方根误差(RMSE)和最大误差在内的评估指标表明,QR-MLP模型优于其他模型,载药量的测试R分数为0.99917,细胞活力的测试R分数为0.99111。这些发现为其化学和生物学用途提供了新的视角,因为它们展示了堆叠集成方法在处理具有挑战性的数据集和优化基于MOF的药物递送系统方面的效率。未来的工作将集中在提高生物相容性和优化药物释放曲线,以进一步提高基于MOF的递送系统的临床适用性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2064/12350912/295ba49808cf/41598_2025_15879_Fig1_HTML.jpg

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