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DNA连接酶-腺苷酸中间体的结构:赖氨酸(ε-氨基)连接的单磷酸腺苷酰胺

Structure of the DNA ligase-adenylate intermediate: lysine (epsilon-amino)-linked adenosine monophosphoramidate.

作者信息

Gumport R I, Lehman I R

出版信息

Proc Natl Acad Sci U S A. 1971 Oct;68(10):2559-63. doi: 10.1073/pnas.68.10.2559.

DOI:10.1073/pnas.68.10.2559
PMID:4944632
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC389468/
Abstract

Proteolytic degradation of the Escherichia coli DNA ligase-adenylate intermediate releases adenosine 5'-monophosphate linked to the epsilon-amino group of lysine by a phosphoamide bond. Measurements of the rate of hydroxylaminolysis of the ligase-adenylate provide further support for a phosphoamide linkage in the native enzyme. Lysine (epsilon-amino)-linked adenosine monophosphoramidate has also been isolated from the T4 phage-induced ligase-adenylate intermediate. These results indicate that an initial step of the DNA ligase reaction consists of the nucleophilic attack of the epsilon-amino group of a lysine residue of the enzyme on the adenylyl phosphorus of DPN or ATP that leads to the formation of enzyme-bound lysine (epsilonamino)-linked adenosine monophosphoramidate.

摘要

大肠杆菌DNA连接酶-腺苷酸中间体的蛋白水解降解会释放出通过磷酰胺键与赖氨酸的ε-氨基相连的5'-单磷酸腺苷。对连接酶-腺苷酸的羟氨解速率的测量进一步支持了天然酶中存在磷酰胺键。赖氨酸(ε-氨基)连接的单磷酸腺苷酰胺也已从T4噬菌体诱导的连接酶-腺苷酸中间体中分离出来。这些结果表明,DNA连接酶反应的初始步骤包括酶的赖氨酸残基的ε-氨基对DPN或ATP的腺苷酰磷进行亲核攻击,从而导致形成酶结合的赖氨酸(ε-氨基)连接的单磷酸腺苷酰胺。

相似文献

1
Structure of the DNA ligase-adenylate intermediate: lysine (epsilon-amino)-linked adenosine monophosphoramidate.DNA连接酶-腺苷酸中间体的结构:赖氨酸(ε-氨基)连接的单磷酸腺苷酰胺
Proc Natl Acad Sci U S A. 1971 Oct;68(10):2559-63. doi: 10.1073/pnas.68.10.2559.
2
Enzymatic joining of DNA strands, II. An enzyme-adenylate intermediate in the dpn-dependent DNA ligase reaction.DNA链的酶促连接,II。依赖二磷酸吡啶核苷酸的DNA连接酶反应中的酶-腺苷酸中间体。
Proc Natl Acad Sci U S A. 1967 Nov;58(5):2004-11. doi: 10.1073/pnas.58.5.2004.
3
Covalent joining of phenylalanine transfer ribonucleic acid half-molecules by T4 RNA ligase.通过T4 RNA连接酶实现苯丙氨酸转移核糖核酸半分子的共价连接。
Proc Natl Acad Sci U S A. 1974 Sep;71(9):3741-5. doi: 10.1073/pnas.71.9.3741.
4
Enzymatic breakage and joining of deoxyribonucleic acid. IV. DNA synthesis in E. coli infected with ligase-negative mutants of phage T4.脱氧核糖核酸的酶促断裂与连接。IV. 感染噬菌体T4连接酶阴性突变体的大肠杆菌中的DNA合成。
Proc Natl Acad Sci U S A. 1968 Dec;61(4):1328-35. doi: 10.1073/pnas.61.4.1328.
5
Enzymatic breadage and joining of deoxyribonucleic acid. 3. An enzyme-adenylate intermediate in the polynucleotide ligase reaction.脱氧核糖核酸的酶促断裂与连接。3. 多核苷酸连接酶反应中的酶 - 腺苷酸中间体。
J Biol Chem. 1967 Sep 25;242(18):4270-2.
6
Ezymatic breakage and joining of deoxyribonucleic acid. VII. Properties of the enzyme-adenylate intermediate in the polynucleotide ligase reaction.脱氧核糖核酸的酶促断裂与连接。VII. 多核苷酸连接酶反应中酶 - 腺苷酸中间体的性质。
J Biol Chem. 1968 Sep 10;243(17):4556-63.
7
A stereochemical study of the mechanism of activation of donor oligonucleotides by RNA ligase from bacteriophage T4 infected Escherichia coli.对来自噬菌体T4感染的大肠杆菌的RNA连接酶激活供体寡核苷酸机制的立体化学研究。
Biochemistry. 1985 Dec 3;24(25):7446-9. doi: 10.1021/bi00346a062.
8
DNA ligase: structure, mechanism, and function.DNA连接酶:结构、机制与功能
Science. 1974 Nov 29;186(4166):790-7. doi: 10.1126/science.186.4166.790.
9
Mammalian deoxyribonucleic acid ligase. Isolation of an active enzyme-adenylate complex.哺乳动物脱氧核糖核酸连接酶。活性酶 - 腺苷酸复合物的分离。
J Biol Chem. 1973 Jan 25;248(2):672-5.
10
[Hydrolytic stability of a covalent AMP-RNA ligase complex].[共价AMP - RNA连接酶复合物的水解稳定性]
Bioorg Khim. 1985 Jun;11(6):821-5.

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