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通过体外转录比较多瘤病毒早期和晚期启动子

Comparison of the polyoma virus early and late promoters by transcription in vitro.

作者信息

Jat P, Roberts J W, Cowie A, Kamen R

出版信息

Nucleic Acids Res. 1982 Feb 11;10(3):871-87. doi: 10.1093/nar/10.3.871.

DOI:10.1093/nar/10.3.871
PMID:6174941
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC326208/
Abstract

Polyoma virus DNA was transcribed in the HeLa whole cell extract in vitro system (1). Early region transcripts with the same 5'-ends as in vivo mRNAs, located 31 +/- 2bp from 'TATA'-boxes, were synthesized by RNA polymerase II. Sequences sufficient for efficient expression of the early promoter were present in a substitution mutant lacking viral DNA from a position 55bp before the principal cap sites. Late region transcripts were synthesised inefficiently. Only one (at nt5129 +/- 2) of the many late mRNA cap sites functioned as an in vitro initiation point. This was the one 5'-end located 31 +/- 2bp from a sequence resembling the 'TATA' consensus. The proportion of late to early region RNA polymerase II transcripts decreased dramatically at suboptimal template concentrations. An hypothesis to explain the regulation of late gene expression in vivo based on these results is proposed. A linear templates were transcribed only by RNA polymerase II, transcripts with the same sense as late mRNAs and 5'-ends at nt5076 +/- 2 were produced from superhelical template by an alpha amanitin resistant enzyme.

摘要

多瘤病毒DNA在体外的HeLa全细胞提取物系统中进行转录(1)。早期区域转录本与体内mRNA具有相同的5'端,位于距“TATA”框31±2bp处,由RNA聚合酶II合成。在一个缺失主要帽位点前55bp处病毒DNA的替代突变体中,存在足以有效表达早期启动子的序列。晚期区域转录本的合成效率较低。许多晚期mRNA帽位点中只有一个(位于nt5129±2处)作为体外起始点发挥作用。这是唯一一个5'端位于距类似“TATA”共有序列31±2bp处的位点。在次优模板浓度下,晚期与早期区域RNA聚合酶II转录本的比例急剧下降。基于这些结果,提出了一个解释体内晚期基因表达调控的假说。线性模板仅由RNA聚合酶II转录,超螺旋模板通过一种α-鹅膏蕈碱抗性酶产生与晚期mRNA具有相同意义且5'端位于nt5076±2处的转录本。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dc00/326208/425e0f4ba531/nar00372-0106-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dc00/326208/8aa191f8efb9/nar00372-0099-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dc00/326208/6fa7f574f881/nar00372-0102-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dc00/326208/d86dace6d785/nar00372-0104-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dc00/326208/425e0f4ba531/nar00372-0106-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dc00/326208/8aa191f8efb9/nar00372-0099-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dc00/326208/6fa7f574f881/nar00372-0102-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dc00/326208/d86dace6d785/nar00372-0104-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dc00/326208/425e0f4ba531/nar00372-0106-a.jpg

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本文引用的文献

1
Transcription of adenovirus type 2 genes in a cell-free system: apparent heterogeneity of initiation at some promoters.2型腺病毒基因在无细胞体系中的转录:某些启动子起始位点的明显异质性
Mol Cell Biol. 1981 Jul;1(7):635-51. doi: 10.1128/mcb.1.7.635-651.1981.
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Nature. 1980 May 15;285(5761):147-51. doi: 10.1038/285147a0.
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A control region in the center of the 5S RNA gene directs specific initiation of transcription: II. The 3' border of the region.
SV40和多瘤病毒的早期及晚期控制序列均可促进转染细胞中大肠杆菌gpt基因的转录。
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Proc Natl Acad Sci U S A. 1982 Dec;79(23):7142-6. doi: 10.1073/pnas.79.23.7142.
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In vitro transcription of two Epstein-Barr virus specified small RNA molecules.两种爱泼斯坦-巴尔病毒特异性小RNA分子的体外转录
Nucleic Acids Res. 1982 Jun 11;10(11):3407-25. doi: 10.1093/nar/10.11.3407.
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DNA sequences required for specific and efficient initiation of transcription at the polyoma virus early promoter.多瘤病毒早期启动子特异性和高效转录起始所需的DNA序列。
Mol Cell Biol. 1982 Jul;2(7):737-51. doi: 10.1128/mcb.2.7.737-751.1982.
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Location of sequences in polyomavirus DNA that are required for early gene expression in vivo and in vitro.多瘤病毒DNA中体内和体外早期基因表达所需序列的定位。
Mol Cell Biol. 1984 Dec;4(12):2594-609. doi: 10.1128/mcb.4.12.2594-2609.1984.
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Isolation of a polyomavirus with an insertion of foreign DNA in the early gene promoter region.一种在早期基因启动子区域插入外源DNA的多瘤病毒的分离。
J Virol. 1984 Dec;52(3):1032-5. doi: 10.1128/JVI.52.3.1032-1035.1984.
10
Adenovirus E1a proteins repress expression from polyomavirus early and late promoters.腺病毒E1a蛋白可抑制多瘤病毒早期和晚期启动子的表达。
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5S RNA基因中心的一个控制区域指导转录的特异性起始:II. 该区域的3'边界。
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Mouse beta-globin and adenovirus-2 major late transcripts are initiated at the cap site in vitro.小鼠β-珠蛋白和腺病毒2型主要晚期转录本在体外于帽位点起始。
Proc Natl Acad Sci U S A. 1981 Apr;78(4):2283-6. doi: 10.1073/pnas.78.4.2283.
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Identification of regulatory sequences in the prelude sequences of an H2A histone gene by the study of specific deletion mutants in vivo.通过对体内特定缺失突变体的研究鉴定H2A组蛋白基因前奏序列中的调控序列。
Proc Natl Acad Sci U S A. 1980 Mar;77(3):1432-6. doi: 10.1073/pnas.77.3.1432.
10
The structures of the spliced mRNAs encoding polyoma virus early region proteins.编码多瘤病毒早期区域蛋白的剪接后信使核糖核酸的结构。
J Mol Appl Genet. 1981;1(2):83-92.