• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

真核生物启动子中的物理特征。

Physical characteristics in eucaryotic promoters.

作者信息

Bensimhon M, Gabarro-Arpa J, Ehrlich R, Reiss C

出版信息

Nucleic Acids Res. 1983 Jul 11;11(13):4521-40. doi: 10.1093/nar/11.13.4521.

DOI:10.1093/nar/11.13.4521
PMID:6306592
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC326062/
Abstract

For a series of wild type and mutated eucaryotic gene prelude sequences (mainly "promoters" of SV40 early gene (Benoist and Chambon, Nature 290, 304 (1981); Moreau et al., Nuc. Acids Res. 9, 6047 (1982)) and of Herpes Simplex Virus TK gene (McKnight and Kingsbury, Science 217, 316 (1982)), in vivo promoter activity and local stability (denaturability) have been correlated. In agreement with the conclusions drawn in these papers, the correlation points to three major eucaryotic promoter elements and loci: (i) enzyme enabling by an enhancer sequence; SV40 and Moloney Sarcoma Virus enhancers have a striking stability homology; (ii) enzyme activation, occurring 50-70 b.p. upstream the cap site in a high stability domain; the enzyme apparently deactivates exponentially upon moving away to trap site; (iii) enzyme positioning at trap site, 30 +/- 5 b.p. upstream the cap site. The trap site contains the TATA box, or, when absent, other low stability domains downstream the activator. The number and occupancy of cap sites may depend on the stability and size of the trap site-cap site couple and its distance from the activator.

摘要

对于一系列野生型和突变型真核基因前导序列(主要是SV40早期基因的“启动子”(贝努瓦和尚邦,《自然》290, 304 (1981);莫罗等人,《核酸研究》9, 6047 (1982))以及单纯疱疹病毒TK基因的启动子(麦克奈特和金斯伯里,《科学》217, 316 (1982)),体内启动子活性和局部稳定性(变性能力)已被关联起来。与这些论文得出的结论一致,这种关联指向三个主要的真核启动子元件和位点:(i) 通过增强子序列实现酶的激活;SV40和莫洛尼肉瘤病毒增强子具有显著的稳定性同源性;(ii) 酶的激活,发生在帽位点上游50 - 70个碱基对处的一个高稳定性区域;当向捕获位点移动时,酶明显呈指数级失活;(iii) 酶在捕获位点的定位,位于帽位点上游30 ± 5个碱基对处。捕获位点包含TATA框,或者在其缺失时,包含激活剂下游的其他低稳定性区域。帽位点的数量和占据情况可能取决于捕获位点 - 帽位点对的稳定性和大小以及它与激活剂的距离。

相似文献

1
Physical characteristics in eucaryotic promoters.真核生物启动子中的物理特征。
Nucleic Acids Res. 1983 Jul 11;11(13):4521-40. doi: 10.1093/nar/11.13.4521.
2
Thymidine kinase of herpes virus as a vehicle for the isolation and characterization of unknown mammalian promoters and enhancers.疱疹病毒胸苷激酶作为分离和鉴定未知哺乳动物启动子及增强子的载体。
J Mol Appl Genet. 1984;2(4):363-71.
3
Characterization of eukaryotic transcriptional control signals by assay of herpes simplex virus type 1 thymidine kinase.通过1型单纯疱疹病毒胸苷激酶检测对真核转录控制信号进行表征。
J Gen Virol. 1983 Dec;64 ( Pt 12):2679-96. doi: 10.1099/0022-1317-64-12-2679.
4
Local stability involved in characterizing and controlling promoters in eukaryotes.
Folia Biol (Praha). 1984;30 Spec No:93-104.
5
Effect of methylation on expression of microinjected genes.甲基化对显微注射基因表达的影响。
Proc Natl Acad Sci U S A. 1982 Feb;79(4):1106-10. doi: 10.1073/pnas.79.4.1106.
6
Mapping functional domains in the promoter region of the herpes thymidine kinase gene.绘制疱疹胸苷激酶基因启动子区域的功能结构域图谱。
Proc Natl Acad Sci U S A. 1981 Oct;78(10):6276-80. doi: 10.1073/pnas.78.10.6276.
7
Transfection with the isolated herpes simplex virus thymidine kinase genes. I. Minimal size of the active fragments from HSV-1 and HSV-2.用分离出的单纯疱疹病毒胸苷激酶基因进行转染。I. 来自HSV-1和HSV-2的活性片段的最小大小。
J Gen Virol. 1982 Oct;62 (Pt 2):191-206. doi: 10.1099/0022-1317-62-2-191.
8
Functional analysis of a herpes simplex virus type 1 promoter: identification of far-upstream regulatory sequences.单纯疱疹病毒1型启动子的功能分析:远端上游调控序列的鉴定
Nucleic Acids Res. 1983 Apr 25;11(8):2347-65. doi: 10.1093/nar/11.8.2347.
9
Expression of herpesvirus thymidine kinase gene under control of early promoter of SV40.在SV40早期启动子控制下的疱疹病毒胸苷激酶基因的表达。
Virology. 1982 Mar;117(2):536-40. doi: 10.1016/0042-6822(82)90496-2.
10
Effects of an upstream DNA curvature on the strength of HSV thymidine kinase promoter.上游DNA弯曲对单纯疱疹病毒胸苷激酶启动子强度的影响。
Nucleic Acids Symp Ser. 1995(34):67-8.

引用本文的文献

1
Transcription regulation of E-cadherin by zinc finger E-box binding homeobox proteins in solid tumors.实体瘤中锌指E盒结合同源框蛋白对E-钙黏蛋白的转录调控
Biomed Res Int. 2014;2014:921564. doi: 10.1155/2014/921564. Epub 2014 Aug 13.
2
Sequence comparisons of three wild-type Bronze-1 alleles from Zea mays.对来自玉米的三个野生型 Bronze-1 等位基因的序列比较。
Plant Mol Biol. 1988 Jul;11(4):473-81. doi: 10.1007/BF00039028.
3
The Caenorhabditis elegans APC-related gene apr-1 is required for epithelial cell migration and Hox gene expression.秀丽隐杆线虫的APC相关基因apr-1是上皮细胞迁移和Hox基因表达所必需的。
Genes Dev. 2000 Apr 1;14(7):874-86.
4
Comparison of promoter activity in Aleutian mink disease parvovirus, minute virus of mice, and canine parvovirus: possible role of weak promoters in the pathogenesis of Aleutian mink disease parvovirus infection.阿留申水貂病细小病毒、小鼠微小病毒和犬细小病毒启动子活性的比较:弱启动子在阿留申水貂病细小病毒感染发病机制中的可能作用
J Virol. 1993 Apr;67(4):1877-86. doi: 10.1128/JVI.67.4.1877-1886.1993.
5
Repeated consensus sequence and pseudopromoters in the four coordinately regulated tubulin genes of Chlamydomonas reinhardi.莱茵衣藻四个协同调控的微管蛋白基因中的重复共有序列和假启动子。
Mol Cell Biol. 1984 Jun;4(6):1115-24. doi: 10.1128/mcb.4.6.1115-1124.1984.
6
Generation and functional analyses for base-substitution mutants of the adenovirus 2 major late promoter.腺病毒2型主要晚期启动子碱基替换突变体的产生及功能分析
Nucleic Acids Res. 1984 Dec 21;12(24):9309-21. doi: 10.1093/nar/12.24.9309.
7
Analysis of DNA sequences which regulate the transcription of a herpes simplex virus immediate early gene.调控单纯疱疹病毒立即早期基因转录的DNA序列分析
J Virol. 1984 Jun;50(3):708-16. doi: 10.1128/JVI.50.3.708-716.1984.
8
Dilute-coat-color locus of mice: nucleotide sequence analysis of the d+2J and d+Ha revertant alleles.小鼠稀释毛色基因座:d+2J和d+Ha回复等位基因的核苷酸序列分析
Mol Cell Biol. 1984 Dec;4(12):2899-904. doi: 10.1128/mcb.4.12.2899-2904.1984.
9
Isolation of a polyomavirus with an insertion of foreign DNA in the early gene promoter region.一种在早期基因启动子区域插入外源DNA的多瘤病毒的分离。
J Virol. 1984 Dec;52(3):1032-5. doi: 10.1128/JVI.52.3.1032-1035.1984.
10
trans-Activation of parvovirus P38 promoter by the 76K noncapsid protein.细小病毒P38启动子被76K非衣壳蛋白反式激活。
J Virol. 1985 Sep;55(3):886-9. doi: 10.1128/JVI.55.3.886-889.1985.

本文引用的文献

1
Ubiquitous and gene-specific regulatory 5' sequences in a sea urchin histone DNA clone coding for histone protein variants.一个编码组蛋白变体的海胆组蛋白DNA克隆中普遍存在的和基因特异性的调控5'序列。
Nucleic Acids Res. 1980 Mar 11;8(5):957-77. doi: 10.1093/nar/8.5.957.
2
Multiple mRNAs are generated from the chicken lysozyme gene.鸡溶菌酶基因可产生多种信使核糖核酸。
Cell. 1981 Sep;25(3):743-52. doi: 10.1016/0092-8674(81)90182-3.
3
The hierarchical approach to the DNA stability problem. I. Patterns in non-equilibrium denaturation and renaturation.解决DNA稳定性问题的分层方法。I. 非平衡变性与复性模式
Biochimie. 1982 Feb;64(2):99-112. doi: 10.1016/s0300-9084(82)80412-4.
4
The hierarchical approach to the DNA stability problem. II. Some applications and speculations with yeast mitochondrial DNA as an example.
Biochimie. 1982 Feb;64(2):113-26. doi: 10.1016/s0300-9084(82)80413-6.
5
Key for protein coding sequences identification: computer analysis of codon strategy.蛋白质编码序列识别的关键:密码子策略的计算机分析
Nucleic Acids Res. 1982 Jan 11;10(1):391-402. doi: 10.1093/nar/10.1.391.
6
The ribosome binding sites recognized by E. coli ribosomes have regions with signal character in both the leader and protein coding segments.大肠杆菌核糖体识别的核糖体结合位点在前导序列和蛋白质编码序列中都有具有信号特征的区域。
Nucleic Acids Res. 1980 Sep 11;8(17):3895-907. doi: 10.1093/nar/8.17.3895.
7
The gene for polypeptide IX of adenovirus type 2 and its unspliced messenger RNA.2型腺病毒多聚肽IX基因及其未剪接的信使核糖核酸。
Cell. 1980 Mar;19(3):671-81. doi: 10.1016/s0092-8674(80)80044-4.
8
Identification of regulatory sequences in the prelude sequences of an H2A histone gene by the study of specific deletion mutants in vivo.通过对体内特定缺失突变体的研究鉴定H2A组蛋白基因前奏序列中的调控序列。
Proc Natl Acad Sci U S A. 1980 Mar;77(3):1432-6. doi: 10.1073/pnas.77.3.1432.
9
Organization and expression of eucaryotic split genes coding for proteins.编码蛋白质的真核生物断裂基因的组织与表达。
Annu Rev Biochem. 1981;50:349-83. doi: 10.1146/annurev.bi.50.070181.002025.
10
[Analysis of the stability and local cooperativity of DNA: proposal of a molecular mechanism for the initiation of the transcription of gene A3 of bacteriophage T7 by the RNA polymerase from E. coli].[DNA的稳定性和局部协同性分析:关于大肠杆菌RNA聚合酶启动噬菌体T7基因A3转录的分子机制的提议]
C R Seances Acad Sci III. 1981 Jan 12;292(2):177-80.