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鸡的六种主要组蛋白编码基因的基因组组织:H5基因的完整序列

Genomic organization of the genes coding for the six main histones of the chicken: complete sequence of the H5 gene.

作者信息

Ruiz-Carrillo A, Affolter M, Renaud J

出版信息

J Mol Biol. 1983 Nov 15;170(4):843-59. doi: 10.1016/s0022-2836(83)80191-0.

DOI:10.1016/s0022-2836(83)80191-0
PMID:6315952
Abstract

The organization of the genes coding for histones in the chicken has been examined, with special reference to that coding for the tissue-specific, developmentally regulated histone H5. Two recombinant phages containing sequences complementary to cloned H5 cDNA have been isolated from a genomic chicken library. The clones have been characterized by heteroduplex formation, restriction nuclease analysis, hybridization to cloned homologous histone gene probes, and DNA sequencing. Hybridization to genomic DNA has shown that there is only one copy of the H5 gene per haploid genome, whereas there are six to 11 copies of the genes for the other histones. Examination of 29 X 10(3) base-pairs of DNA sequences flanking the H5 gene has revealed the absence of any other histone genes which, although not tandemly reiterated, for the most part appear to reside in loosely organized clusters. The complete DNA sequence of the H5 gene and flanking regions, as well as the mapping of the 5'-end of its messenger RNA by primer extension with AMV reverse transcriptase, has shown that the gene has no introns and little homology to other histone genes, including those for H1.

摘要

已对鸡中编码组蛋白的基因组织进行了研究,特别参考了编码组织特异性、发育调控的组蛋白H5的基因。从鸡基因组文库中分离出了两个与克隆的H5 cDNA互补序列的重组噬菌体。这些克隆已通过异源双链体形成、限制性核酸酶分析、与克隆的同源组蛋白基因探针杂交以及DNA测序进行了表征。与基因组DNA杂交表明,单倍体基因组中每个H5基因只有一个拷贝,而其他组蛋白基因有6到11个拷贝。对H5基因两侧29×10³个碱基对的DNA序列进行检查发现,没有任何其他组蛋白基因,这些基因虽然不是串联重复的,但在很大程度上似乎位于松散组织的簇中。H5基因及其侧翼区域的完整DNA序列,以及通过AMV逆转录酶进行引物延伸对其信使RNA 5′端的定位,表明该基因没有内含子,与其他组蛋白基因几乎没有同源性,包括H1的基因。

相似文献

1
Genomic organization of the genes coding for the six main histones of the chicken: complete sequence of the H5 gene.鸡的六种主要组蛋白编码基因的基因组组织:H5基因的完整序列
J Mol Biol. 1983 Nov 15;170(4):843-59. doi: 10.1016/s0022-2836(83)80191-0.
2
Genomic organization, DNA sequence, and expression of chicken embryonic histone genes.鸡胚胎组蛋白基因的基因组组织、DNA序列及表达
J Biol Chem. 1983 Jul 25;258(14):9005-16.
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Chicken histone H5: selection of a cDNA recombinant using an extended synthetic primer.鸡组蛋白H5:使用延伸合成引物筛选cDNA重组体。
Nucleic Acids Res. 1982 Mar 11;10(5):1495-502. doi: 10.1093/nar/10.5.1495.
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The chicken H5 gene is unlinked to core and H1 histone genes.鸡的H5基因与核心组蛋白基因和H1组蛋白基因不连锁。
Nucleic Acids Res. 1983 Feb 11;11(3):619-27. doi: 10.1093/nar/11.3.619.
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The histone H5 gene is flanked by S1 hypersensitive structures.组蛋白H5基因两侧是S1超敏结构。
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Construction of chimeric plasmids containing histone H5 cDNA from hen erythrocyte. DNA sequence of a fragment derived from the 5' region of H5 mRNA.构建含有来自母鸡红细胞组蛋白H5 cDNA的嵌合质粒。源自H5 mRNA 5'区域的片段的DNA序列。
Nucleic Acids Res. 1982 Mar 25;10(6):2093-108. doi: 10.1093/nar/10.6.2093.
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Histone genes are clustered but not tandemly repeated in the chicken genome.组蛋白基因在鸡基因组中是成簇排列的,但不是串联重复的。
Proc Natl Acad Sci U S A. 1981 May;78(5):2856-60. doi: 10.1073/pnas.78.5.2856.
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Isolation of a genomal clone containing chicken histone genes.包含鸡组蛋白基因的基因组克隆的分离
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Reiteration frequency of the gene for tissue-specific histone H5 in the chicken genome.鸡基因组中组织特异性组蛋白H5基因的重复频率。
Nature. 1976 Feb 26;259(5545):635-8. doi: 10.1038/259635a0.

引用本文的文献

1
Common evolutionary origin and birth-and-death process in the replication-independent histone H1 isoforms from vertebrate and invertebrate genomes.脊椎动物和无脊椎动物基因组中与复制无关的组蛋白H1亚型的共同进化起源和生死过程。
J Mol Evol. 2005 Sep;61(3):398-407. doi: 10.1007/s00239-004-0328-9. Epub 2005 Jul 28.
2
Initiation binding repressor, a factor that binds to the transcription initiation site of the histone h5 gene, is a glycosylated member of a family of cell growth regulators [corrected].起始结合阻遏物是一种与组蛋白h5基因转录起始位点结合的因子,是细胞生长调节因子家族的一个糖基化成员[已修正]。
Mol Cell Biol. 1995 Dec;15(12):6670-85. doi: 10.1128/MCB.15.12.6670.
3
Transcription of the histone H5 gene is regulated by three differentiation-specific enhancers.
组蛋白H5基因的转录受三个分化特异性增强子调控。
Mol Cell Biol. 1993 Aug;13(8):4904-17. doi: 10.1128/mcb.13.8.4904-4917.1993.
4
Modular sequence elements associated with origin regions in eukaryotic chromosomal DNA.与真核生物染色体DNA起始区域相关的模块化序列元件。
Nucleic Acids Res. 1994 Jul 11;22(13):2479-89. doi: 10.1093/nar/22.13.2479.
5
Are there major developmentally regulated H4 gene classes in Xenopus?非洲爪蟾中是否存在主要受发育调控的H4基因类别?
Nucleic Acids Res. 1984 Jun 25;12(12):4939-58. doi: 10.1093/nar/12.12.4939.
6
The histone H5 gene is flanked by S1 hypersensitive structures.组蛋白H5基因两侧是S1超敏结构。
Nucleic Acids Res. 1984 Aug 24;12(16):6473-92. doi: 10.1093/nar/12.16.6473.
7
Inverted duplication of histone genes in chicken and disposition of regulatory sequences.鸡中组蛋白基因的反向重复及调控序列的分布
Nucleic Acids Res. 1985 Feb 25;13(4):1369-87. doi: 10.1093/nar/13.4.1369.
8
Structure and organization of the chicken H2B histone gene family.鸡H2B组蛋白基因家族的结构与组织
Nucleic Acids Res. 1987 Feb 11;15(3):1063-80. doi: 10.1093/nar/15.3.1063.
9
Compilation analysis of histones and histone genes.组蛋白和组蛋白基因的汇编分析
Nucleic Acids Res. 1986;14 Suppl(Suppl):r119-49. doi: 10.1093/nar/14.suppl.r119.
10
H5 gene specific trans-activation by nuclear extracts from avian erythroid cells.禽红细胞细胞核提取物对H5基因的特异性反式激活作用。
Mol Cell Biol. 1987 Oct;7(10):3853-6. doi: 10.1128/mcb.7.10.3853-3856.1987.