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编码0.7kb转录本的冠瘿瘤T-DNA的DNA序列分析。

DNA sequence analysis of crown gall tumor T-DNA encoding the 0.7 kb transcript.

作者信息

McPherson J C

出版信息

Nucleic Acids Res. 1984 Mar 12;12(5):2317-25. doi: 10.1093/nar/12.5.2317.

DOI:10.1093/nar/12.5.2317
PMID:6324113
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC318664/
Abstract

Crown gall tumor formation involves integration into the plant genome of DNA sequences (the T-region) of tumor-inducing (Ti) plasmids present in Agrobacterium tumefaciens. The T-DNA of the tumor expresses several gene products. Little is known about the function or regulation of expression of the 0.7kb transcript, which represents a relatively abundant T-DNA transcript in octopine-type tumors. In this report, a detailed structural analysis of the gene encoding the 0.7 kb transcript has been obtained by DNA sequence analysis of T-DNA isolated from A6S/2 tumor line. An indication of the structural characteristics of the protein product is obtained from the predicted amino acid sequence. The sequences flanking the open reading frame show characteristics with other eucaryotic genes. The corresponding DNA sequence of the inducing Ti plasmid (pTiA6) is identical with that of the DNA sequence from the tumor. Comparison of this gene sequence with the corresponding region of another Ti plasmid (pTiAch5) shows several differences in the 5' flanking sequence, but the nucleotide sequence of the coding region and 3' flanking region are identical.

摘要

冠瘿瘤的形成涉及到根癌土壤杆菌中存在的致瘤(Ti)质粒的DNA序列(T区域)整合到植物基因组中。肿瘤的T-DNA表达几种基因产物。对于在章鱼碱型肿瘤中相对丰富的0.7kb转录本的功能或表达调控了解甚少。在本报告中,通过对从A6S/2肿瘤系分离的T-DNA进行DNA序列分析,获得了编码0.7kb转录本的基因的详细结构分析。从预测的氨基酸序列中可以了解蛋白质产物的结构特征。开放阅读框两侧的序列显示出与其他真核基因的特征。诱导性Ti质粒(pTiA6)的相应DNA序列与来自肿瘤的DNA序列相同。将该基因序列与另一个Ti质粒(pTiAch5)的相应区域进行比较,发现在5'侧翼序列中有几个差异,但编码区和3'侧翼区的核苷酸序列是相同的。

相似文献

1
DNA sequence analysis of crown gall tumor T-DNA encoding the 0.7 kb transcript.编码0.7kb转录本的冠瘿瘤T-DNA的DNA序列分析。
Nucleic Acids Res. 1984 Mar 12;12(5):2317-25. doi: 10.1093/nar/12.5.2317.
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Proc Natl Acad Sci U S A. 1984 Dec;81(23):7495-9. doi: 10.1073/pnas.81.23.7495.
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引用本文的文献

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Factors affecting the level of kanamycin resistance in transformed sunflower cells.影响转化向日葵细胞中卡那霉素抗性水平的因素。
Plant Physiol. 1987 Aug;84(4):1185-92. doi: 10.1104/pp.84.4.1185.

本文引用的文献

1
Cytokinin/auxin balance in crown gall tumors is regulated by specific loci in the T-DNA.冠瘿瘤中的细胞分裂素/生长素平衡受 T-DNA 中特定基因座的调节。
Proc Natl Acad Sci U S A. 1983 Jan;80(2):407-11. doi: 10.1073/pnas.80.2.407.
2
Octopine synthase mRNA isolated from sunflower crown gall callus is homologous to the Ti plasmid of Agrobacterium tumefaciens.从向日葵冠瘿组织中分离出的瓜氨酸合酶 mRNA 与根癌农杆菌 Ti 质粒同源。
Proc Natl Acad Sci U S A. 1982 Jan;79(1):86-90. doi: 10.1073/pnas.79.1.86.
3
Proteins encoded by Agrobacterium tumefaciens Ti plasmid DNA (T-DNA) in crown gall tumors.
根癌农杆菌 Ti 质粒 DNA(T-DNA)在冠瘿瘤中编码的蛋白质。
Proc Natl Acad Sci U S A. 1980 May;77(5):2666-70. doi: 10.1073/pnas.77.5.2666.
4
Genetic Identification of functions of TL-DNA transcripts in octopine crown galls.在毛叶冠瘿碱型根瘤中鉴定 TL-DNA 转录本的功能
EMBO J. 1982;1(1):147-52. doi: 10.1002/j.1460-2075.1982.tb01138.x.
5
The TL-DNA in octopine crown-gall tumours codes for seven well-defined polyadenylated transcripts.在毛叶番荔枝冠瘿瘤的 TL-DNA 中,编码了 7 个明确的多聚腺苷酸化转录本。
EMBO J. 1982;1(1):139-46. doi: 10.1002/j.1460-2075.1982.tb01137.x.
6
Identification of sequences involved in the polyadenylation of higher plant nuclear transcripts using Agrobacterium T-DNA genes as models.以农杆菌T-DNA基因作为模型鉴定高等植物核转录本聚腺苷酸化所涉及的序列。
EMBO J. 1983;2(3):419-26. doi: 10.1002/j.1460-2075.1983.tb01439.x.
7
The conserved part of the T-region in Ti-plasmids expresses four proteins in bacteria.Ti质粒中T区域的保守部分在细菌中表达四种蛋白质。
EMBO J. 1983;2(3):403-9. doi: 10.1002/j.1460-2075.1983.tb01437.x.
8
A new computer method for the storage and manipulation of DNA gel reading data.一种用于存储和处理DNA凝胶读数数据的新型计算机方法。
Nucleic Acids Res. 1980 Aug 25;8(16):3673-94. doi: 10.1093/nar/8.16.3673.
9
Transcription of the Agrobacterium Ti plasmid in the bacterium and in crown gall tumors.根癌土壤杆菌Ti质粒在细菌及冠瘿瘤中的转录
Plasmid. 1981 Jul;6(1):17-29. doi: 10.1016/0147-619x(81)90051-2.
10
Nucleotide sequence and transcript map of the Agrobacterium tumefaciens Ti plasmid-encoded octopine synthase gene.根癌土壤杆菌Ti质粒编码的章鱼碱合酶基因的核苷酸序列和转录图谱。
J Mol Appl Genet. 1982;1(6):499-511.