Balazs A C, Epstein I R
Biophys J. 1983 Nov;44(2):145-51. doi: 10.1016/S0006-3495(83)84286-6.
A one-dimensional kinetic Ising model is developed to describe the binding of myosin subfragment 1 (SF-1) to regulated actin. The model allows for cooperative interactions between individual actin sites with bound SF-1 ligands rather than assuming that groups of actin monomer sites change their state in a cooperative fashion. With the triplet closure approximation, the model yields a set of 16 independent differential (master) equations which may be solved numerically to yield the extent of binding as a function of time. The predictions of the model are compared with experiments on the transient binding of SF-1 to regulated actin in the presence of Ca2+ and in the absence of Ca2+ with varying amounts of SF-1 prebound to the actin filament and on the equilibrium binding of SF-1 X ADP to regulated actin in the absence of Ca2+. In all cases, the calculations fit the data to within the experimental errors. In the case of SF-1 X ADP, the results suggest that a repulsive interaction exists between adjacently bound SF-1 at the ends of two neighboring seven-site actin units.
开发了一种一维动力学伊辛模型来描述肌球蛋白亚片段1(SF-1)与调节型肌动蛋白的结合。该模型考虑了与结合有SF-1配体的各个肌动蛋白位点之间的协同相互作用,而不是假设肌动蛋白单体位点组以协同方式改变其状态。通过三重态闭合近似,该模型产生一组16个独立的微分(主)方程,这些方程可以通过数值求解以得到结合程度随时间的变化。将该模型的预测结果与以下实验进行了比较:在存在Ca2+和不存在Ca2+的情况下,SF-1与调节型肌动蛋白的瞬时结合,其中肌动蛋白丝预先结合了不同量的SF-1;以及在不存在Ca2+的情况下,SF-1 X ADP与调节型肌动蛋白的平衡结合。在所有情况下,计算结果与实验误差范围内的数据相符。对于SF-1 X ADP的情况,结果表明在两个相邻的七位点肌动蛋白单元末端相邻结合的SF-1之间存在排斥相互作用。