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菠菜叶绿体DNA上核糖体RNA基因的定位

Mapping of the ribosomal RNA genes on spinach chloroplast DNA.

作者信息

Whitfeld P R, Herrmann R G, Bottomley W

出版信息

Nucleic Acids Res. 1978 Jun;5(6):1741-51. doi: 10.1093/nar/5.6.1741.

DOI:10.1093/nar/5.6.1741
PMID:673835
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC342122/
Abstract

Spinach chloroplast ribosomal RNAs have been hybridized to restriction endonuclease fragments of spinach chloroplast DNA. All three RNA species (23S, 16S and 5S) hybridized to a single large fragment when the DNA was digested with either Sall or Pstl. Hybridization of 23S RNA to fragments produced by Smal yielded two radioactive bands which corresponded to the bi-molar 2.5 X 10(6) and 1.15 X 10(6) Mr fragments. 16S RNA also hybridized to two, bi-molar Smal fragments (3.4 X 10(6) and 2.5 X 10(6) Mr) and 5S RNA hybridized to the 1.15 X 10(6) Mr bi-molar Smal fragment. The 23S RNA and 16S RNA cistrons were each also shown to contain a single EcoRI site. From the data it was possible to conclude that the ribosomal RNA genes are located on the inverted repeat region of the spinach chloroplast DNA restriction map [1,2], that the sequence of the cistrons is 16S - 23S - 5S and that the size of the spacer between the 16S and 23S RNA cistrons is approximately 0.90 X 10(6) Mr.

摘要

菠菜叶绿体核糖体RNA已与菠菜叶绿体DNA的限制性内切酶片段进行杂交。当用SalI或PstI消化DNA时,所有三种RNA种类(23S、16S和5S)都与一个单一的大片段杂交。23S RNA与SmaI产生的片段杂交产生了两条放射性条带,分别对应于双分子的2.5×10⁶和1.15×10⁶道尔顿的片段。16S RNA也与两个双分子的SmaI片段(3.4×10⁶和2.5×10⁶道尔顿)杂交,5S RNA与1.15×10⁶道尔顿的双分子SmaI片段杂交。23S RNA和16S RNA顺反子各自还显示含有一个单一的EcoRI位点。从这些数据可以得出结论,核糖体RNA基因位于菠菜叶绿体DNA限制性图谱的反向重复区域[1,2],顺反子的序列为16S - 23S - 5S,并且16S和23S RNA顺反子之间间隔区的大小约为0.90×10⁶道尔顿。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e475/342122/8829931e2b8f/nar00467-0028-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e475/342122/0f8e87f73173/nar00467-0027-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e475/342122/8829931e2b8f/nar00467-0028-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e475/342122/0f8e87f73173/nar00467-0027-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e475/342122/8829931e2b8f/nar00467-0028-a.jpg

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Mapping of the ribosomal RNA genes on spinach chloroplast DNA.菠菜叶绿体DNA上核糖体RNA基因的定位
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引用本文的文献

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Plant Mol Biol. 1983 Mar;2(2):95-107. doi: 10.1007/BF01595171.
2
Mapping of genes on the chloroplast DNA of Spirodela oligorhiza.螺旋藻叶绿体 DNA 基因图谱。
Plant Mol Biol. 1982 Jun;1(2):117-31. doi: 10.1007/BF00024975.
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Localization of the gene for apocytochromeb-559 on the plastid chromosome of spinach.

本文引用的文献

1
Endonuclease recognition sites mapped on Zea mays chloroplast DNA.绘制在玉米叶绿体DNA上的核酸内切酶识别位点
Proc Natl Acad Sci U S A. 1976 Dec;73(12):4309-13. doi: 10.1073/pnas.73.12.4309.
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Ribonucleic acid synthesizing activity of spinach chloroplasts and nuclei.菠菜叶绿体和细胞核的核糖核酸合成活性。
Arch Biochem Biophys. 1967 Aug;121(2):336-45. doi: 10.1016/0003-9861(67)90085-9.
3
Non-random differences in the base composition of chloroplas and cytoplasmic ribosomal RNA from some higher plants.一些高等植物叶绿体和细胞质核糖体RNA碱基组成的非随机差异。
叶绿体基因组中脱细胞色素 b-559 基因的定位。
Plant Mol Biol. 1985 Mar;4(2-3):103-10. doi: 10.1007/BF02418756.
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The region distal to the rRNA operon from chloroplasts of maize contains genes coding for tRNA(Arg)(ACG) and tRNA (Asn)(GUU).来自玉米叶绿体 rRNA 操纵子远端的区域包含编码 tRNA(Arg)(ACG)和 tRNA (Asn)(GUU)的基因。
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Characterization of the spinach chloroplast genes for the S4 ribosomal protein, tRNA(Thr) (UGU) and tRNA (Ser) (GGA).菠菜叶绿体 S4 核糖体蛋白、tRNA(苏氨酸)(UGU)和 tRNA(丝氨酸)(GGA)基因的特性。
Plant Mol Biol. 1986 Jan;7(1):63-70. doi: 10.1007/BF00020132.
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Sequence organization of the chloroplast ribosomal spacer ofSpinacia oleracea including the 3' end of the 16S rRNA and the 5' end of the 23S rRNA.菠菜叶绿体核糖体间隔区的序列组织,包括 16S rRNA 的 3'端和 23S rRNA 的 5'端。
Plant Mol Biol. 1987 Jan;10(1):53-63. doi: 10.1007/BF00014186.
7
Restriction endonuclease cleavage site map of chloroplast DNA from Oenothera parviflora (Euoenothera plastome IV).来自小花月见草(真月见草质体 IV)的叶绿体 DNA 的限制内切酶酶切位点图谱。
Theor Appl Genet. 1981 Sep;59(5):281-96. doi: 10.1007/BF00264980.
8
Comparative macromolecular analysis of the cytoplasms of normal and cytoplasmic male sterile Brassica napus.正常和细胞质雄性不育甘蓝型油菜细胞质的比较大分子分析。
Theor Appl Genet. 1982 Sep;62(3):255-62. doi: 10.1007/BF00276248.
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Physical maps of Nicotiana chloroplast DNA constructed by an efficient procedure.利用高效程序构建的 Nicotiana 叶绿体 DNA 物理图谱。
Theor Appl Genet. 1992 Feb;83(4):515-27. doi: 10.1007/BF00226542.
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Biochimie. 1974;56(1):77-89. doi: 10.1016/s0300-9084(74)80357-3.
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