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来自小牛胸腺的DNA聚合酶α的亚种在复制合成模板引物时具有不同的保真度。

Subspecies of DNA polymerase alpha from calf thymus with different fidelity in copying synthetic template-primers.

作者信息

Brosius S, Grosse F, Krauss G

出版信息

Nucleic Acids Res. 1983 Jan 11;11(1):193-202. doi: 10.1093/nar/11.1.193.

DOI:10.1093/nar/11.1.193
PMID:6866763
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC325698/
Abstract

Three different subspecies of DNA polymerase alpha from calf thymus sedimenting at 9 S, 7 S and 5.7 S have been investigated with respect to their accuracy of in vitro DNA synthesis on poly (dA) (dT)16 and poly d(AT) as template-primers. Our results indicate that the structure of DNA polymerase alpha has a strong influence on the accuracy of DNA synthesis. The 9 S enzyme shows a misincorporation frequency of about 1:100 000. An error rate of 1:15 000 is measured for the 7 S species. The 5.7 S enzyme for which an error rate of 1:3 000 is determined, has to be considered as error prone. Lowering the rate of DNA synthesis leads to a decrease in fidelity. The single stranded DNA binding protein from E.coli increases the accuracy of the 5.7 S and the 7 S enzyme by a factor of two. Mn2+ decreases the fidelity of all three subspecies in a concentration dependent manner.

摘要

对小牛胸腺中沉降系数分别为9S、7S和5.7S的三种不同亚种的DNA聚合酶α,就其以聚(dA)(dT)16和聚d(AT)作为模板引物进行体外DNA合成的准确性进行了研究。我们的结果表明,DNA聚合酶α的结构对DNA合成的准确性有很大影响。9S酶的错误掺入频率约为1:100 000。7S亚种的错误率为1:15 000。5.7S酶的错误率为1:3 000,必须被视为易出错的。降低DNA合成速率会导致保真度下降。来自大肠杆菌的单链DNA结合蛋白使5.7S和7S酶的准确性提高了两倍。Mn2+以浓度依赖的方式降低了所有三个亚种的保真度。

相似文献

1
Subspecies of DNA polymerase alpha from calf thymus with different fidelity in copying synthetic template-primers.来自小牛胸腺的DNA聚合酶α的亚种在复制合成模板引物时具有不同的保真度。
Nucleic Acids Res. 1983 Jan 11;11(1):193-202. doi: 10.1093/nar/11.1.193.
2
The elongation of mismatched primers by DNA polymerase alpha from calf thymus.小牛胸腺DNA聚合酶α对错配引物的延伸作用。
Nucleic Acids Res. 1983 Oct 25;11(20):7251-60. doi: 10.1093/nar/11.20.7251.
3
Primed and unprimed synthesis of poly (dA-dT) by calf thymus DNA polymerase alpha.小牛胸腺DNA聚合酶α引发和未引发的聚(dA-dT)合成
J Biol Chem. 1977 Mar 25;252(6):1932-7.
4
Calf thymus DNA polymerases alpha and delta are capable of highly processive DNA synthesis.小牛胸腺DNA聚合酶α和δ能够进行高度持续的DNA合成。
Biochemistry. 1988 Apr 19;27(8):2998-3004. doi: 10.1021/bi00408a050.
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Utilization in vitro of deoxyuridine triphosphate in DNA synthesis by DNA polymerases alpha and beta from calf thymus.小牛胸腺DNA聚合酶α和β在DNA合成中对三磷酸脱氧尿苷的体外利用
Biochim Biophys Acta. 1979 Feb 27;561(2):396-402. doi: 10.1016/0005-2787(79)90147-3.
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Further characterization of a poly(rA) . oligo(dT)-dependent activity of multiple DNA polymerase alpha from calf thymus.小牛胸腺中多种DNA聚合酶α的聚(rA)·寡聚(dT)依赖性活性的进一步表征。
Biochim Biophys Acta. 1981 Jul 27;654(2):194-200. doi: 10.1016/0005-2787(81)90172-6.
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An auxiliary protein for DNA polymerase-delta from fetal calf thymus.来自胎牛胸腺的DNA聚合酶δ辅助蛋白。
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Further studies on partially purified calf thymus DNA polymerase a.小牛胸腺DNA聚合酶α部分纯化的进一步研究
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Novel properties of DNA polymerase beta with poly(rA).oligo(dT) template-primer.DNA聚合酶β与聚(rA)·寡聚(dT)模板引物的新特性
J Biochem. 1979 Jun;85(6):1387-95. doi: 10.1093/oxfordjournals.jbchem.a132465.
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Studies on the purification and properties of a 6.8-S DNA polymerase activity found in calf-thymus DNA polymerase-alpha fraction.对在小牛胸腺DNA聚合酶α组分中发现的一种6.8-S DNA聚合酶活性的纯化及性质研究。
Eur J Biochem. 1978 Mar;84(1):123-31. doi: 10.1111/j.1432-1033.1978.tb12148.x.

引用本文的文献

1
The elongation of mismatched primers by DNA polymerase alpha from calf thymus.小牛胸腺DNA聚合酶α对错配引物的延伸作用。
Nucleic Acids Res. 1983 Oct 25;11(20):7251-60. doi: 10.1093/nar/11.20.7251.
2
Exonucleolytic proofreading by calf thymus DNA polymerase delta.小牛胸腺DNA聚合酶δ的核酸外切酶校对作用。
Proc Natl Acad Sci U S A. 1987 Jul;84(14):4865-9. doi: 10.1073/pnas.84.14.4865.
3
On the fidelity of DNA polymerase alpha: the influence of alpha-thio dNTPs, Mn2+ and mismatch repair.关于DNA聚合酶α的保真度:α-硫代脱氧核苷三磷酸、锰离子和错配修复的影响
Nucleic Acids Res. 1985 Aug 12;13(15):5685-95. doi: 10.1093/nar/13.15.5685.
4
Exonucleolytic proofreading increases the accuracy of DNA synthesis by human lymphocyte DNA polymerase alpha-DNA primase.核酸外切校正提高了人淋巴细胞DNA聚合酶α-DNA引发酶进行DNA合成的准确性。
EMBO J. 1989 Jun;8(6):1833-9. doi: 10.1002/j.1460-2075.1989.tb03578.x.

本文引用的文献

1
Kinetic characteristics which distinguish two forms of calf thymus DNA polymerase alpha.区分小牛胸腺DNA聚合酶α两种形式的动力学特征。
Biochemistry. 1981 Jan 6;20(1):227-32. doi: 10.1021/bi00504a038.
2
Purification and partial characterization of a DNA polymerase alpha species from calf thymus.从小牛胸腺中纯化并部分鉴定一种DNA聚合酶α。
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Selective inhibition of terminal deoxynucleotidyl transferase by diadenosine 5',5"-P1,P4-tetraphosphate.5',5''-P1,P4-四磷酸二腺苷对末端脱氧核苷酸转移酶的选择性抑制作用
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Eukaryotic DNA polymerase alpha. Structural analysis of the enzyme from regenerating rat liver.真核生物DNA聚合酶α。来自再生大鼠肝脏的该酶的结构分析。
J Biol Chem. 1980 Mar 10;255(5):2114-22.
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Properties of DNA polymerases from young and ageing human fibroblasts.
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Purification of a 9S DNA polymerase alpha species from calf thymus.从小牛胸腺中纯化9S DNA聚合酶α种类。
Biochemistry. 1981 Sep 15;20(19):5470-5. doi: 10.1021/bi00522a019.
7
Escherichia coli single-strand deoxyribonucleic acid binding protein: stability, specificity, and kinetics of complexes with oligonucleotides and deoxyribonucleic acid.大肠杆菌单链脱氧核糖核酸结合蛋白:与寡核苷酸和脱氧核糖核酸形成复合物的稳定性、特异性及动力学
Biochemistry. 1981 Sep 1;20(18):5346-52. doi: 10.1021/bi00521a040.
8
Accessory proteins for DNA polymerase alpha activity with single-strand DNA templates.用于DNA聚合酶α活性且以单链DNA为模板的辅助蛋白。
Proc Natl Acad Sci U S A. 1981 Aug;78(8):4723-7. doi: 10.1073/pnas.78.8.4723.
9
Elongation of RNA-primed DNA templates by DNA polymerase alpha from Drosophila melanogaster embryos.黑腹果蝇胚胎的DNA聚合酶α对RNA引发的DNA模板的延伸作用。
J Biol Chem. 1981 Aug 10;256(15):8202-7.
10
Fidelity of mammalian DNA polymerases.哺乳动物DNA聚合酶的保真度。
Science. 1981 Aug 14;213(4509):765-7. doi: 10.1126/science.6454965.