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多头绒泡菌中核糖基因被脱氧核糖核酸酶I降解。

Degradation of the ribosomal genes by DNAse I in Physarum polycephalum.

作者信息

Stalder J, Seebeck T, Braun R

出版信息

Eur J Biochem. 1978 Oct;90(2):391-5. doi: 10.1111/j.1432-1033.1978.tb12616.x.

DOI:10.1111/j.1432-1033.1978.tb12616.x
PMID:710437
Abstract

Treatment of nuclei from Physarum polycephalum with DNAse I leads to DNA fragments with a regular pattern of multiples of 10 nucleotides, when analyzed on gels under denaturing conditions as has been shown for other eukaryotes. Reports from Weintraub and Axel lead to the conclusion, that active genes are preferentially digested by DNAse I. When Physarum chromatin is degraded by DNAse I, the ribosomal genes are no longer available for hybridization with 19-S and 26-S rRNA and are thus preferentially destroyed. Degradation of chromatin from nuclei in mitosis, where no rRNA is synthesized and from nuclei in late G2 phase, where rRNA synthesis is maximal, leads to the same proportion of the ribosomal sequences being lost for hybridization. Therefore the preferential degradation of the ribosomal genes in Physarum by DNAse I probably does not reflect the actual momentary activity of these genes. This suggests that DNAse I treatment may distinguish between active chromatin and very strongly repressed chromatin.

摘要

用脱氧核糖核酸酶I处理多头绒泡菌的细胞核,在变性条件下于凝胶上进行分析时,会产生具有规则模式的、以10个核苷酸为倍数的DNA片段,这与其他真核生物的情况相同。温特劳布和阿克塞尔的报告得出结论,即活性基因优先被脱氧核糖核酸酶I消化。当多头绒泡菌染色质被脱氧核糖核酸酶I降解时,核糖体基因不再可用于与19 - S和26 - S rRNA杂交,因此被优先破坏。对有丝分裂期细胞核(此时不合成rRNA)和G2期后期细胞核(此时rRNA合成最大)的染色质进行降解,导致用于杂交的核糖体序列损失比例相同。因此,脱氧核糖核酸酶I对多头绒泡菌核糖体基因的优先降解可能并不反映这些基因的实际瞬时活性。这表明脱氧核糖核酸酶I处理可能能够区分活性染色质和受到极强抑制的染色质。

相似文献

1
Degradation of the ribosomal genes by DNAse I in Physarum polycephalum.多头绒泡菌中核糖基因被脱氧核糖核酸酶I降解。
Eur J Biochem. 1978 Oct;90(2):391-5. doi: 10.1111/j.1432-1033.1978.tb12616.x.
2
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Structure of plant nuclear and ribosomal DNA containing chromatin.含有染色质的植物核DNA和核糖体DNA的结构。
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The structure of chromatin containing DNA complementary to 19 S and 26 S ribosomal RNA in active and inactive stages of Physarum polycephalum.多头绒泡菌活跃期和静止期含有与19 S和26 S核糖体RNA互补的DNA的染色质结构。
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Initiation of transcription of ribosomal deoxyribonucleic acid sequences in isolated nuclei of Physarum polycephalum: studies using nucleoside 5'-[gamma-S]triphosphates and labeled precursors.多头绒泡菌分离细胞核中核糖体脱氧核糖核酸序列转录的起始:使用核苷5'-[γ-S]三磷酸和标记前体的研究
Biochemistry. 1979 Oct 16;18(21):4572-80. doi: 10.1021/bi00588a018.

引用本文的文献

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Limited DNase I nicking as a probe of gene conformation.有限的脱氧核糖核酸酶I切口作为基因构象的一种探测方法。
Proc Natl Acad Sci U S A. 1980 Apr;77(4):1907-11. doi: 10.1073/pnas.77.4.1907.
2
DNase I sensitivity of ribosomal genes in isolated nucleosome core particles.核糖体基因在分离的核小体核心颗粒中的脱氧核糖核酸酶I敏感性
Nucleic Acids Res. 1980 Jan 11;8(1):197-214. doi: 10.1093/nar/8.1.197-e.
3
Accurate transcription of simian virus 40 chromatin in a HeLa cell extract.猴病毒40染色质在人宫颈癌细胞提取物中的准确转录。
J Virol. 1982 Dec;44(3):772-81. doi: 10.1128/JVI.44.3.772-781.1982.
4
Accessibility of ribosomal genes to trimethyl psoralen in nuclei of Physarum polycephalum.多头绒泡菌细胞核中核糖体基因对三甲基补骨脂素的可及性。
Mol Cell Biol. 1982 Mar;2(3):211-20. doi: 10.1128/mcb.2.3.211-220.1982.
5
Nuclease sensitivity of chromatin containing active genes: kinetic analyses utilizing continuous elution of digestion products from an ultrafiltration cell.含有活性基因的染色质的核酸酶敏感性:利用从超滤池中连续洗脱消化产物的动力学分析。
Nucleic Acids Res. 1981 Nov 11;9(21):5825-43. doi: 10.1093/nar/9.21.5825.
6
Simian virus 40 maturation: chromatin modifications increase the accessibility of viral DNA to nuclease and RNA polymerase.猿猴病毒40的成熟:染色质修饰增加病毒DNA对核酸酶和RNA聚合酶的可及性。
J Virol. 1981 Aug;39(2):603-11. doi: 10.1128/JVI.39.2.603-611.1981.
7
Selective release of HMG nonhistone proteins during DNase digestion of Tetrahymena chromatin at different stages of the cell cycle.在细胞周期不同阶段,四膜虫染色质经脱氧核糖核酸酶消化时HMG非组蛋白的选择性释放。
Nucleic Acids Res. 1980 Nov 25;8(22):5275-88. doi: 10.1093/nar/8.22.5275.
8
Condensation of chromatin into chromosomes preserves an open configuration but alters the DNase I hypersensitive cleavage sites of the transcribed gene.染色质凝聚成染色体保持开放构型,但会改变转录基因的DNA酶I超敏切割位点。
Nucleic Acids Res. 1982 Aug 11;10(15):4565-79. doi: 10.1093/nar/10.15.4565.
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Properties of active nucleosomes as revealed by HMG 14 and 17 chromatography.通过HMG 14和17色谱法揭示的活性核小体的特性。
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Mouse hepatic metallothionein-I gene cleavage by micrococcal nuclease is enhanced after induction by cadmium.镉诱导后,微球菌核酸酶对小鼠肝脏金属硫蛋白-I基因的切割作用增强。
Nucleic Acids Res. 1983 May 25;11(10):3255-67. doi: 10.1093/nar/11.10.3255.