Kawamura Y, Hou X G, Sultana F, Liu S, Yamamoto H, Ezaki T
Department of Microbiology, Gifu University School of Medicine, Japan.
Int J Syst Bacteriol. 1995 Oct;45(4):798-803. doi: 10.1099/00207713-45-4-798.
We performed this study to determine the 16S rRNA sequences of the type strains of Streptococcus adjacens and Streptococcus defectivus and to calculate the phylogenetic distances between these two nutritionally variant streptococci (NVS) and other members of the genus Streptococcus. S. adjacens and S. defectivus belonged to one cluster, but this cluster was not closely related to other streptococcal species. A comparative analysis of the sequences of these organisms and other low-G+C-content gram-positive bacteria revealed that the two NVS species formed a distinct cluster and were only remotely related to the Aerococcus and Carnobacterium clusters. The highest level of homology (93.7%) was found between S. adjacens and Carnobacterium divergens. Carnobacterium species have meso-diaminopimelic acid in their cell walls, but S. adjacens and S. defectivus have L-lysine as the diamino acid at position 3 in their peptidoglycan tetrapeptides. On the basis of our findings and the results of previous phenotypic studies, we propose that the NVS species should be placed in a new genus, the genus Abiotrophia, as Abiotrophia adiacens comb. nov. and Abiotrophia defectiva comb. nov.
我们开展这项研究,以确定毗邻链球菌和缺陷链球菌模式菌株的16S rRNA序列,并计算这两种营养变异型链球菌(NVS)与链球菌属其他成员之间的系统发育距离。毗邻链球菌和缺陷链球菌属于一个聚类,但该聚类与其他链球菌种类并无密切关系。对这些生物体与其他低G+C含量革兰氏阳性菌的序列进行比较分析后发现,这两种NVS种类形成了一个独特的聚类,且仅与气球菌属和肉杆菌属聚类存在较远的关系。毗邻链球菌与分歧肉杆菌之间的同源性最高(93.7%)。肉杆菌属种类的细胞壁含有内消旋二氨基庚二酸,但毗邻链球菌和缺陷链球菌在其肽聚糖四肽的第3位将L-赖氨酸作为二氨基酸。基于我们的研究结果以及之前表型研究的结果,我们建议将NVS种类归入一个新属,即贫养菌属,分别为毗邻贫养菌新组合(Abiotrophia adiacens comb. nov.)和缺陷贫养菌新组合(Abiotrophia defectiva comb. nov.)。