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本文引用的文献

1
Dielectric Relaxation of Molecules with Fluctuating Dipole Moment.具有波动偶极矩的分子的介电弛豫
Biophys J. 1965 Sep;5(5):617-28. doi: 10.1016/s0006-3495(65)86740-6.
2
The Influence of Dipole Moment Fluctuations on the Dielectric Increment of Proteins in Solution.偶极矩涨落对溶液中蛋白质介电增量的影响。
Proc Natl Acad Sci U S A. 1952 Oct;38(10):855-62. doi: 10.1073/pnas.38.10.855.
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[DIELECTRIC PROPERTIES OF HEMOGLOBIN AND CAUSES OF THEIR GENESIS. I].[血红蛋白的介电特性及其成因。一]
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4
Use of protein database for the computation of the dipole moments of normal and abnormal hemoglobins.利用蛋白质数据库计算正常和异常血红蛋白的偶极矩。
Biophys J. 1993 May;64(5):1550-8. doi: 10.1016/S0006-3495(93)81524-8.
5
Prediction of pH-dependent properties of proteins.蛋白质pH依赖性性质的预测。
J Mol Biol. 1994 May 6;238(3):415-36. doi: 10.1006/jmbi.1994.1301.
6
Preparation of derivatives of ferrous and ferric hemoglobin.亚铁血红蛋白和高铁血红蛋白衍生物的制备。
Methods Enzymol. 1981;76:57-72. doi: 10.1016/0076-6879(81)76114-7.
7
Polarized absorption and linear dichroism spectroscopy of hemoglobin.血红蛋白的偏振吸收和线性二色性光谱
Methods Enzymol. 1981;76:175-261. doi: 10.1016/0076-6879(81)76126-3.
8
Hydrodynamic properties of complex, rigid, biological macromolecules: theory and applications.复杂、刚性生物大分子的流体动力学性质:理论与应用
Q Rev Biophys. 1981 Feb;14(1):81-139. doi: 10.1017/s0033583500002080.
9
Structure and dynamics of a tryptophanepeptide-polynucleotide complex.色氨酸肽 - 多核苷酸复合物的结构与动力学
Nucleic Acids Res. 1980 Apr 11;8(7):1591-612. doi: 10.1093/nar/8.7.1591.
10
The crystal structure of human deoxyhaemoglobin at 1.74 A resolution.分辨率为1.74埃的人脱氧血红蛋白晶体结构。
J Mol Biol. 1984 May 15;175(2):159-74. doi: 10.1016/0022-2836(84)90472-8.

通过电二色性测量和计算机模拟研究血红蛋白的静电学

Electrostatics of hemoglobins from measurements of the electric dichroism and computer simulations.

作者信息

Antosiewicz J, Porschke D

机构信息

Department of Biophysics, Warsaw University, Poland.

出版信息

Biophys J. 1995 Feb;68(2):655-64. doi: 10.1016/S0006-3495(95)80226-2.

DOI:10.1016/S0006-3495(95)80226-2
PMID:7696517
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1281729/
Abstract

Hemoglobins from normal human cells, from sickle cells, and from horse were investigated by electrooptical methods in their oxy and deoxy forms. The reduced linear dichroism measured as a function of the electric field strength demonstrates the existence of permanent dipole moments in the range of 250-400 Debye units. The reduced limiting dichroism is relatively small (< or = 0.1); it is negative for hemoglobin from sickle cells and positive for the hemoglobins from normal human cells and from horse. The dichroism decay time constants are in the range from about 55 to 90 ns. Calculations of the electrooptical data from available crystal structures are given according to models of various complexity, including Monte Carlo simulations of proton fluctuations with energies evaluated by a finite difference Poisson-Boltzmann procedure. The experimental dipole moments are shown to be consistent with the results of the calculations. In the case of human deoxyhemoglobin, the root mean square dipole is higher than the mean dipole by a factor of about 4.5, indicating a particularly large relative contribution due to proton fluctuations. The ratio of the root mean square dipole to the mean dipole is much smaller (approximately 1.1 to approximately 1.5) for the other hemoglobin molecules. The calculations demonstrate that the dichroism decay time constants are not simply determined by the size/shape of the proteins, but are strongly influenced by the orientation of the dipole vector with respect to the axis of maximal absorbance. The comparison of experimental and calculated electrooptical data provides a useful test for the accuracy of electrostatic calculations and/or for the equivalence of structures in crystals and in solutions.

摘要

采用电光方法研究了来自正常人细胞、镰状细胞和马的血红蛋白的氧合形式和脱氧形式。作为电场强度函数测量的约化线性二色性表明存在250 - 400德拜单位范围内的永久偶极矩。约化极限二色性相对较小(≤0.1);镰状细胞血红蛋白的为负,正常人细胞和马的血红蛋白的为正。二色性衰减时间常数在约55至90纳秒范围内。根据各种复杂程度的模型给出了从可用晶体结构计算电光数据的结果,包括通过有限差分泊松 - 玻尔兹曼程序评估能量的质子涨落的蒙特卡罗模拟。实验偶极矩与计算结果一致。对于人脱氧血红蛋白,均方根偶极比平均偶极大约4.5倍,表明质子涨落的相对贡献特别大。对于其他血红蛋白分子,均方根偶极与平均偶极的比值要小得多(约1.1至约1.5)。计算表明,二色性衰减时间常数并非简单地由蛋白质的大小/形状决定,而是强烈地受到偶极矢量相对于最大吸收轴的取向的影响。实验和计算的电光数据的比较为静电计算的准确性和/或晶体和溶液中结构的等效性提供了有用的检验。