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肺炎克雷伯菌甲硫氨酸补救途径中参与氧化碳-碳键裂解反应的一种酶的纯化与表征

Purification and characterization of an enzyme involved in oxidative carbon-carbon bond cleavage reactions in the methionine salvage pathway of Klebsiella pneumoniae.

作者信息

Myers R W, Wray J W, Fish S, Abeles R H

机构信息

Department of Biochemical Parasitology, Merck Sharp & Dohme Research Laboratories, Rahway, New Jersey 07065.

出版信息

J Biol Chem. 1993 Nov 25;268(33):24785-91.

PMID:8227039
Abstract

The 5-methylthio-D-ribose moiety of 5'-(methylthio)-adenosine is converted to methionine in a wide variety of organisms. 2,3-Diketo-5-methylthio-1-phosphopentane is an advanced intermediate in the methionine recycling pathway present in the Gram-negative bacterium Klebsiella pneumoniae. This unusual metabolite is oxidatively cleaved to yield formate (from C-1), 2-keto-4-methylthiobutyrate (the transamination product of methionine), and 3-methylthiopropionate. To further characterize this oxidative conversion, the desthio analog of the naturally occurring diketone, namely 2,3-diketo-1-phosphohexane I, was synthesized. If the metabolism of I is analogous to that of 2,3-diketo-5-methylthio-1-phosphopentane it should be converted to formate, 2-ketopentanoate, and butyrate. An enzyme (E-1), which mediates the oxidative conversion of I to formate and 2-ketopentanoate, was isolated from extracts of K. pneumoniae. E-1 was purified 100-fold to homogeneity in 10% yield. The native enzyme is a monomeric protein of M(r) 27,000. The activity of E-1 requires magnesium ion as a cofactor. No other prosthetic groups were detected. Incubation of the enzyme with I, under anaerobic conditions, led to the discovery of two intermediates. These species have been identified by 1H and 13C NMR, UV-visible spectroscopy, and model chemistry studies as 2-hydroxy-3-keto-1-phospho-1-hexene II, generated by enolization of I; and 1,2-dihydroxy-3-keto-1-hexene III, generated by enzymatic dephosphorylation of II. Intermediates II and III are released from the active site of the enzyme; III accumulates under anaerobic conditions. Under aerobic conditions, III is non-enzymically oxidized to 2-ketopentanoate, formate, and other products. Compound II was also generated by heating I at pH 7.5 for 7 min. Action of alkaline phosphatase on II produces III.

摘要

在多种生物体中,5'-(甲硫基)-腺苷的5-甲硫基-D-核糖部分会转化为甲硫氨酸。2,3-二酮-5-甲硫基-1-磷酸戊烷是革兰氏阴性菌肺炎克雷伯菌中甲硫氨酸循环途径的一种高级中间体。这种特殊的代谢产物经氧化裂解后生成甲酸(来自C-1)、2-酮-4-甲硫基丁酸(甲硫氨酸的转氨产物)和3-甲硫基丙酸酯。为了进一步表征这种氧化转化过程,合成了天然存在的二酮的脱硫类似物,即2,3-二酮-1-磷酸己烷I。如果I的代谢过程与2,3-二酮-5-甲硫基-1-磷酸戊烷类似,那么它应该会转化为甲酸、2-酮戊酸和丁酸。从肺炎克雷伯菌的提取物中分离出一种酶(E-1),它介导I氧化转化为甲酸和2-酮戊酸。E-1经过100倍纯化达到同质,产率为10%。天然酶是一种分子量为27,000的单体蛋白。E-1的活性需要镁离子作为辅因子。未检测到其他辅基。在厌氧条件下,将该酶与I一起孵育,发现了两种中间体。通过1H和13C核磁共振、紫外可见光谱以及模型化学研究,已将这些物质鉴定为I烯醇化生成的2-羟基-3-酮-1-磷酸-1-己烯II;以及II经酶促去磷酸化生成的1,2-二羟基-3-酮-1-己烯III。中间体II和III从酶的活性位点释放;III在厌氧条件下积累。在有氧条件下,III会非酶促氧化为2-酮戊酸、甲酸和其他产物。化合物II也可通过在pH 7.5下将I加热7分钟生成。碱性磷酸酶作用于II会产生III。

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