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从延伸tRNA到起始tRNA。

From elongator tRNA to initiator tRNA.

作者信息

Varshney U, Lee C P, RajBhandary U L

机构信息

Department of Biology, Massachusetts Institute of Technology, Cambridge 02139.

出版信息

Proc Natl Acad Sci U S A. 1993 Mar 15;90(6):2305-9. doi: 10.1073/pnas.90.6.2305.

DOI:10.1073/pnas.90.6.2305
PMID:8460138
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC46075/
Abstract

We show that the two most important properties needed for a tRNA to function in initiation in Escherichia coli are its ability to be formylated and its ability to bind to the ribosomal P site. This conclusion is based on conversion of two different elongator tRNAs to ones that can act as initiators in E. coli. We transplanted the features unique to E. coli and eubacterial initiator tRNAs to E. coli elongator methionine tRNA (tRNA(Met)) along with an anticodon sequence change and analyzed their activities in initiation in E. coli. Introduction of a C1.A72 mismatch at the end of the acceptor stem of tRNA(Met), which generates the minimal features necessary for formylation, produces a tRNA with very low activity in initiation. Subsequent introduction of three consecutive G.C base pairs at the bottom of the anticodon stem, which is necessary for ribosomal P site binding, produces a tRNA with significant activity in initiation. Furthermore, introduction of the features necessary for formylation and for ribosomal P site binding into E. coli elongator glutamine tRNA produces a tRNA that initiates protein synthesis in E. coli.

摘要

我们发现,在大肠杆菌中,tRNA要在起始过程中发挥作用,需要具备的两个最重要特性是其被甲酰化的能力以及与核糖体P位点结合的能力。这一结论基于将两种不同的延伸tRNA转化为可在大肠杆菌中充当起始tRNA的过程。我们将大肠杆菌和真细菌起始tRNA特有的特征与反密码子序列变化一起移植到大肠杆菌延伸甲硫氨酸tRNA(tRNA(Met))上,并分析了它们在大肠杆菌起始过程中的活性。在tRNA(Met)受体茎末端引入C1.A72错配,这产生了甲酰化所需的最小特征,产生了一种在起始过程中活性非常低的tRNA。随后在反密码子茎底部引入三个连续的G.C碱基对,这是核糖体P位点结合所必需的,产生了一种在起始过程中具有显著活性的tRNA。此外,将甲酰化和核糖体P位点结合所需的特征引入大肠杆菌延伸谷氨酰胺tRNA中,产生了一种能在大肠杆菌中起始蛋白质合成的tRNA。

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From elongator tRNA to initiator tRNA.从延伸tRNA到起始tRNA。
Proc Natl Acad Sci U S A. 1993 Mar 15;90(6):2305-9. doi: 10.1073/pnas.90.6.2305.
2
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Escherichia coli formylmethionine tRNA: mutations in GGGCCC sequence conserved in anticodon stem of initiator tRNAs affect initiation of protein synthesis and conformation of anticodon loop.大肠杆菌甲酰甲硫氨酸转运核糖核酸:起始转运核糖核酸反密码子茎中保守的GGGCCC序列突变影响蛋白质合成起始及反密码子环构象。
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Unconventional initiator tRNAs sustain Escherichia coli.非常规起始 tRNA 维持大肠杆菌生长。
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本文引用的文献

1
Comparison of initiation of protein synthesis in procaryotes, eucaryotes, and organelles.原核生物、真核生物和细胞器中蛋白质合成起始的比较。
Microbiol Rev. 1983 Mar;47(1):1-45. doi: 10.1128/mr.47.1.1-45.1983.
2
Intrinsic precision of aminoacyl-tRNA synthesis enhanced through parallel systems of ligands.通过配体平行系统提高氨酰-tRNA合成的内在精度。
Nat New Biol. 1972 Sep 27;239(91):106-8. doi: 10.1038/newbio239106a0.
3
In vitro conversion of a methionine to a glutamine-acceptor tRNA.甲硫氨酸在体外转化为谷氨酰胺受体tRNA。
Front Chem. 2021 Oct 26;9:772648. doi: 10.3389/fchem.2021.772648. eCollection 2021.
4
Regulation of translation by one-carbon metabolism in bacteria and eukaryotic organelles.一碳代谢在细菌和真核细胞器中转译的调控。
J Biol Chem. 2021 Jan-Jun;296:100088. doi: 10.1074/jbc.REV120.011985. Epub 2020 Nov 21.
5
Hijacking Translation Initiation for Synthetic Biology.劫持翻译起始用于合成生物学。
Chembiochem. 2020 May 15;21(10):1387-1396. doi: 10.1002/cbic.202000017. Epub 2020 Mar 2.
6
Messing up translation from the start: How AtaT inhibits translation initiation in E. coli.从一开始就搞砸翻译:AtaT 如何抑制大肠杆菌中的翻译起始。
RNA Biol. 2018 Mar 4;15(3):303-307. doi: 10.1080/15476286.2017.1391439. Epub 2018 Jan 30.
7
Measurements of translation initiation from all 64 codons in E. coli.对大肠杆菌中所有64种密码子的翻译起始进行测量。
Nucleic Acids Res. 2017 Apr 20;45(7):3615-3626. doi: 10.1093/nar/gkx070.
8
Two highly conserved features of bacterial initiator tRNAs license them to pass through distinct checkpoints in translation initiation.细菌起始 tRNA 的两个高度保守的特征使它们能够通过翻译起始过程中的不同检查点。
Nucleic Acids Res. 2017 Feb 28;45(4):2040-2050. doi: 10.1093/nar/gkw854.
9
Evolution of initiator tRNAs and selection of methionine as the initiating amino acid.起始tRNA的进化以及甲硫氨酸作为起始氨基酸的选择。
RNA Biol. 2016 Sep;13(9):810-9. doi: 10.1080/15476286.2016.1195943. Epub 2016 Jun 20.
10
Mechanism and Regulation of Protein Synthesis in Saccharomyces cerevisiae.酿酒酵母中蛋白质合成的机制与调控
Genetics. 2016 May;203(1):65-107. doi: 10.1534/genetics.115.186221.
Biochemistry. 1985 Dec 3;24(25):7309-14. doi: 10.1021/bi00346a043.
4
Escherichia coli formylmethionine tRNA: mutations in GGGCCC sequence conserved in anticodon stem of initiator tRNAs affect initiation of protein synthesis and conformation of anticodon loop.大肠杆菌甲酰甲硫氨酸转运核糖核酸:起始转运核糖核酸反密码子茎中保守的GGGCCC序列突变影响蛋白质合成起始及反密码子环构象。
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5
Mutants of Escherichia coli formylmethionine tRNA: a single base change enables initiator tRNA to act as an elongator in vitro.大肠杆菌甲酰甲硫氨酸转运RNA的突变体:单个碱基的改变使起始转运RNA在体外能够充当延伸转运RNA。
Proc Natl Acad Sci U S A. 1987 Dec;84(24):8859-63. doi: 10.1073/pnas.84.24.8859.
6
Accuracy of in vivo aminoacylation requires proper balance of tRNA and aminoacyl-tRNA synthetase.体内氨基酰化的准确性需要tRNA和氨基酰-tRNA合成酶的适当平衡。
Science. 1988 Dec 16;242(4885):1548-51. doi: 10.1126/science.3144042.
7
Posttranscriptional regulatory mechanisms in Escherichia coli.大肠杆菌中的转录后调控机制。
Annu Rev Biochem. 1988;57:199-233. doi: 10.1146/annurev.bi.57.070188.001215.
8
Suppression of amber codons in vivo as evidence that mutants derived from Escherichia coli initiator tRNA can act at the step of elongation in protein synthesis.体内琥珀密码子的抑制作用表明,源自大肠杆菌起始tRNA的突变体可在蛋白质合成的延伸步骤中发挥作用。
J Biol Chem. 1989 Apr 15;264(11):6504-8.
9
Modeling with in vitro kinetic parameters for the elaboration of transfer RNA identity in vivo.
Biochemistry. 1989 Jun 13;28(12):4942-7. doi: 10.1021/bi00438a005.
10
Structure of E. coli glutaminyl-tRNA synthetase complexed with tRNA(Gln) and ATP at 2.8 A resolution.分辨率为2.8埃时与tRNA(Gln)和ATP复合的大肠杆菌谷氨酰胺-tRNA合成酶的结构。
Science. 1989 Dec 1;246(4934):1135-42. doi: 10.1126/science.2479982.