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在酿酒酵母四号染色体的一个12.5千碱基对片段上发现了新的开放阅读框,其中一个与棕色固氮菌的nifV基因相似。

New open reading frames, one of which is similar to the nifV gene of Azotobacter vinelandii, found on a 12.5 kbp fragment of chromosome IV of Saccharomyces cerevisiae.

作者信息

Verhasselt P, Voet M, Volckaert G

机构信息

University of Leuven, Laboratory of Gene Technology, Belgium.

出版信息

Yeast. 1995 Aug;11(10):961-6. doi: 10.1002/yea.320111007.

Abstract

The nucleotide sequence of a 12.5 kbp segment of the left arm of chromosome IV is described. Five open reading frames (ORFs) longer than 100 amino acids were detected, all of which are completely confined to the 12.5 kbp region. Two ORFs (D1271 and D1286) correspond to previously sequenced genes (PPH22 and VMA1 or TFP1, respectively). ORF D1298 shows the characteristics of alpha-isopropylmalate and homocitrate synthase genes and is similar to the nifV gene of Azotobacter vinelandii. Two more ORFs have no apparent homologue in the data libraries. Conversely, two smaller ORFs of 25 and 85 amino acids encoding the ribosomal protein YL41A and an ATPase inhibitor, respectively, were detected. Although a substantial part of the 12.5 kbp fragment apparently lacks protein-coding characteristics, no other elements, such as tRNA genes or transposons, were found.

摘要

描述了第四条染色体左臂12.5千碱基对片段的核苷酸序列。检测到五个长度超过100个氨基酸的开放阅读框(ORF),所有这些开放阅读框都完全局限于12.5千碱基对区域。两个开放阅读框(D1271和D1286)分别对应于先前测序的基因(PPH22和VMA1或TFP1)。开放阅读框D1298显示出α-异丙基苹果酸和高柠檬酸合酶基因的特征,并且与棕色固氮菌的nifV基因相似。另外两个开放阅读框在数据库中没有明显的同源物。相反,检测到两个分别编码核糖体蛋白YL41A和一种ATP酶抑制剂的25个和85个氨基酸的较小开放阅读框。尽管12.5千碱基对片段的很大一部分显然缺乏蛋白质编码特征,但未发现其他元件,如tRNA基因或转座子。

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