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从河口环境分离出的贫营养细菌的数值分类学与生态学

Numerical taxonomy and ecology of oligotrophic bacteria isolated from the estuarine environment.

作者信息

Mallory L M, Austin B, Colwell R R

出版信息

Can J Microbiol. 1977 Jun;23(6):733-50. doi: 10.1139/m77-110.

Abstract

Slow-growing bacteria, isolated on nutrient-rich and nutrient-limited media, from Chesapeake Bay water and sediment samples, were examined for 119 biochemical, cultural, morphological, nutritional, and physiological characters. Those bacteria which grow on low nutrient media, termed oligotrophs, a total of 162 strains, were subjected to taxonomic analysis, as a preliminary step in determining their ecological significance. The data for all strains included in the study were examined by computer and the simple matching (S SM) and Jaccard (SJ) coefficients calculated. Clustering was achieved by the unweighted average-linkage method. From sorted similarity matrices and dendrograms, 148 strains, 90% of the total, were recovered in 24 phenetic groups defined at the 80 to 85% similarity level. Only 12 phena could be presumptively identified and these included representatives of Alcaligenes, Corynebacterium, Hyphomicrobium, Hyphomonas polymorpha, Listeria, Nocardia marina, Pedomicrobium, Planococcus citreus, Sphaerotilus, Streptothrix, and Streptomyces. Of the remaining organisms, 10% were unidentified sheathed bacteria. It is concluded that slow-growing bacteria are distributed throughout the estuarine environment and can account for a large proportion of the colonies observed on media after prolonged periods of incubation. The oligotrophic bacteria appear to predominate in areas where the concentration of available nutrients is low and are more characteristic of non-eutrophic aquatic systems.

摘要

从切萨皮克湾的水样和沉积物样本中,在营养丰富和营养有限的培养基上分离出的生长缓慢的细菌,对其119种生化、培养、形态、营养和生理特征进行了检测。那些在低营养培养基上生长的细菌,即寡营养菌,共162株,作为确定其生态意义的初步步骤,对其进行了分类分析。通过计算机检查了研究中所有菌株的数据,并计算了简单匹配(S SM)和杰卡德(SJ)系数。采用非加权平均连锁法进行聚类。从分类后的相似性矩阵和树状图中,在相似度为80%至85%的水平上定义的24个表型组中回收了148株菌株,占总数的90%。只有12个表型可以初步鉴定,其中包括产碱菌属、棒状杆菌属、生丝微菌属、多形生丝单胞菌、李斯特菌属、海诺卡氏菌属、柄微菌属、柠檬色动性球菌、球衣菌属、链丝菌属和链霉菌属的代表。其余的生物体中,10%是未鉴定的鞘细菌。得出的结论是,生长缓慢的细菌分布在整个河口环境中,并且在长时间培养后,它们可以占培养基上观察到的菌落的很大比例。寡营养细菌似乎在有效养分浓度低的区域占主导地位,并且是非富营养化水生系统更具特征性的细菌。

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