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部分红球菌、棒状杆菌及相关微生物的数值分类

Numerical classification of some Rhodococci, Corynebacteria and related organisms.

作者信息

Goodfellow M, Weaver C R, Minnikin D E

出版信息

J Gen Microbiol. 1982 Apr;128(4):731-45. doi: 10.1099/00221287-128-4-731.

Abstract

Nineteen strains of Corynebacterium sensu stricto, 23 received as Corynebacterium equi or Rhodococcus equi, marker cultures of Arthrobacter, Brevibacterium, Bacterionema matruchotii, Cellulomonas flavigena, Kurthia zopfii, Listeria denitrificans, Microbacterium lacticum, Rhodococcus rubropertinctus and 88 representatives of Mycobacterium, Nocardia, Rhodococcus and the 'aurantiaca' taxon were the subject of numerical phenetic analyses using 92 characters. The data were examined using the simple matching (SSM) and Jaccard (SJ) coefficients and clustering was achieved using the average linkage algorithm. With a single exception, strains containing meso-diaminopimelic acid, arabinose, galactose and mycolic acids were recovered in five aggregate clusters corresponding to Corynebacterium sensu stricto, Mycobacterium, Nocardia, Rhodococcus and the 'aurantiaca' taxon. Most of the Corynebacterium (Rhodococcus) equi strains formed a good taxospecies which included the type strain of Corynebacterium hoagii. The numerical data, and the results of earlier chemical and genetical studies, also provide sufficient evidence for the transfer of Bacterionema matruchotii to Corynebacterium sensu stricto as Corynebacterium matruchotii comb.nov. and for the recognition of Rhodococcus globerulus sp.nov. for some strains previously classified as Rhodococcus rubropertinctus (Hefferan) Goodfellow & Alderson. The classification of the remaining marker strains correlates well with other major developments in coryneform taxonomy.

摘要

对19株严格意义上的棒状杆菌、23株被鉴定为马棒状杆菌或马红球菌的菌株、节杆菌、短杆菌、马氏棒杆菌、黄纤维单胞菌、佐氏库特氏菌、反硝化李斯特菌、乳酸微杆菌、红橙红球菌的标准菌株以及88株分枝杆菌、诺卡氏菌、红球菌和“橙黄类群”的代表菌株进行了数值分类分析,共采用92个特征。使用简单匹配系数(SSM)和杰卡德系数(SJ)对数据进行检验,并采用平均连锁算法进行聚类。除了一个例外,含有内消旋二氨基庚二酸、阿拉伯糖、半乳糖和分枝菌酸的菌株被归为五个聚类群,分别对应严格意义上的棒状杆菌、分枝杆菌、诺卡氏菌、红球菌和“橙黄类群”。大多数马棒状杆菌(马红球菌)菌株形成了一个良好的分类种,其中包括霍氏棒状杆菌的模式菌株。这些数值数据以及早期化学和遗传学研究的结果,也为将马氏棒杆菌重新分类为严格意义上的棒状杆菌属的马氏棒状杆菌(新组合)以及将一些以前被归类为红橙红球菌(赫弗南)古德费洛和奥尔德森的菌株鉴定为球形红球菌(新种)提供了充分的证据。其余标准菌株的分类与棒状杆菌分类学的其他主要进展密切相关。

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