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除草剂与其靶标复合物的作用模式和结构:活化的灭瘟素与腺苷酸琥珀酸合成酶反馈调节位点的结合

The mode of action and the structure of a herbicide in complex with its target: binding of activated hydantocidin to the feedback regulation site of adenylosuccinate synthetase.

作者信息

Fonné-Pfister R, Chemla P, Ward E, Girardet M, Kreuz K E, Honzatko R B, Fromm H J, Schär H P, Grütter M G, Cowan-Jacob S W

机构信息

Pharmaceutical Division, Ciba-Geigy Ltd., Basel, Switzerland.

出版信息

Proc Natl Acad Sci U S A. 1996 Sep 3;93(18):9431-6. doi: 10.1073/pnas.93.18.9431.

DOI:10.1073/pnas.93.18.9431
PMID:8790347
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC38445/
Abstract

(+)-Hydantocidin, a recently discovered natural spironucleoside with potent herbicidal activity, is shown to be a proherbicide that, after phosphorylation at the 5' position, inhibits adenylosuccinate synthetase, an enzyme involved in de novo purine synthesis. The mode of binding of hydantocidin 5'-monophosphate to the target enzyme was analyzed by determining the crystal structure of the enzyme-inhibitor complex at 2.6-A resolution. It was found that adenylosuccinate synthetase binds the phosphorylated compound in the same fashion as it does adenosine 5'-monophosphate, the natural feedback regulator of this enzyme. This work provides the first crystal structure of a herbicide-target complex reported to date.

摘要

(+)-杀稻瘟菌素是最近发现的一种具有强大除草活性的天然螺核苷,它被证明是一种前除草剂,在5'位磷酸化后,可抑制参与嘌呤从头合成的腺苷酸琥珀酸合成酶。通过测定酶-抑制剂复合物在2.6埃分辨率下的晶体结构,分析了杀稻瘟菌素5'-单磷酸与靶酶的结合模式。发现腺苷酸琥珀酸合成酶以与该酶的天然反馈调节剂腺苷5'-单磷酸相同的方式结合磷酸化化合物。这项工作提供了迄今为止报道的第一个除草剂-靶标复合物的晶体结构。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e9c7/38445/56079da420a9/pnas01522-0146-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e9c7/38445/6fcef3080c78/pnas01522-0146-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e9c7/38445/56079da420a9/pnas01522-0146-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e9c7/38445/6fcef3080c78/pnas01522-0146-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e9c7/38445/56079da420a9/pnas01522-0146-b.jpg

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2
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3
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