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Human genomic diversity, viral genomics and proteomics, as exemplified by human papillomaviruses and H5N1 influenza viruses.以人乳头瘤病毒和H5N1流感病毒为例的人类基因组多样性、病毒基因组学和蛋白质组学。
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本文引用的文献

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Two novel genital human papillomavirus (HPV) types, HPV68 and HPV70, related to the potentially oncogenic HPV39.两种新型生殖器人乳头瘤病毒(HPV)类型,HPV68和HPV70,与具有潜在致癌性的HPV39相关。
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Generation of entire human papillomavirus genomes by long PCR: frequency of errors produced during amplification.通过长片段PCR产生完整人乳头瘤病毒基因组:扩增过程中产生错误的频率
Genome Res. 1995 Aug;5(1):79-88. doi: 10.1101/gr.5.1.79.
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Human papillomavirus DNA in urine samples compared with that in simultaneously collected urethra and cervix samples.尿样中的人乳头瘤病毒DNA与同时采集的尿道和宫颈样本中的人乳头瘤病毒DNA的比较。
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Genital HPV infection not a local but a regional infection: experience from a female teenage group.生殖器人乳头瘤病毒感染并非局部感染而是区域感染:来自一个女性青少年群体的经验
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Long PCR.长片段聚合酶链反应
Nature. 1994 Jun 23;369(6482):684-5. doi: 10.1038/369684a0.
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Epidemiology of cervical human papillomavirus infections.宫颈人乳头瘤病毒感染的流行病学
Curr Top Microbiol Immunol. 1994;186:55-81. doi: 10.1007/978-3-642-78487-3_4.
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Human pathogenic papillomavirus types: an update.人乳头瘤病毒致病类型:最新进展
Curr Top Microbiol Immunol. 1994;186:1-12. doi: 10.1007/978-3-642-78487-3_1.
8
Effective amplification of long targets from cloned inserts and human genomic DNA.从克隆插入片段和人类基因组DNA中有效扩增长片段靶标。
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9
PCR amplification of up to 35-kb DNA with high fidelity and high yield from lambda bacteriophage templates.从λ噬菌体模板中以高保真度和高产量进行高达35千碱基DNA的PCR扩增。
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Nucleotide sequence and phylogenetic classification of human papillomavirus type 59.人乳头瘤病毒59型的核苷酸序列及系统发育分类
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从重叠聚合酶链反应产物中克隆的人乳头瘤病毒70型基因组:完整核苷酸序列及基因组结构

Human papillomavirus type 70 genome cloned from overlapping PCR products: complete nucleotide sequence and genomic organization.

作者信息

Forslund O, Hansson B G

机构信息

Department of Medical Microbiology, Lund University, Malmö University Hospital, Sweden.

出版信息

J Clin Microbiol. 1996 Apr;34(4):802-9. doi: 10.1128/jcm.34.4.802-809.1996.

DOI:10.1128/jcm.34.4.802-809.1996
PMID:8815087
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC228896/
Abstract

The genome of human papillomavirus (HPV) type 70 (HPV 70), isolated from a cervical condyloma, was obtained by cloning overlapping PCR products. By automated DNA sequence analysis, the genome was found to consist of 7,905 bp with a G + C content of 40%. The genomic organization showed the characteristic features shared by other sequenced HPVs. Nucleotide sequence comparison with previously known HPV types demonstrated the closest homology with HPV 68 (82%), HPV 39 (82%), HPV 18 (70%), HPV 45 (70%), and HPV 59 (70%). Comparison with seven other partially sequenced HPV 70 isolates showed homologies of between 100 and 99.5%. Cloning of overlapping PCR products and automated DNA sequence analysis was found to be a feasible method of obtaining full-length sequences of HPVs.

摘要

从宫颈湿疣中分离出的人乳头瘤病毒70型(HPV 70)基因组,是通过克隆重叠PCR产物获得的。通过自动化DNA序列分析,发现该基因组由7905个碱基对组成,G + C含量为40%。基因组结构显示出与其他已测序HPV共有的特征。与先前已知HPV类型的核苷酸序列比较表明,与HPV 68(82%)、HPV 39(82%)、HPV 18(70%)、HPV 45(70%)和HPV 59(70%)的同源性最高。与其他七个部分测序的HPV 70分离株比较,同源性在100%至99.5%之间。发现克隆重叠PCR产物和自动化DNA序列分析是获得HPV全长序列的可行方法。