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聚腺苷酸化产生鸡线粒体tRNA(酪氨酸)的识别核苷酸。

Polyadenylation creates the discriminator nucleotide of chicken mitochondrial tRNA(Tyr).

作者信息

Yokobori S, Pääbo S

机构信息

Institute of Zoology, University of Munich, Germany.

出版信息

J Mol Biol. 1997 Jan 17;265(2):95-9. doi: 10.1006/jmbi.1996.0728.

DOI:10.1006/jmbi.1996.0728
PMID:9020972
Abstract

In the chicken mitochondrial genome, the gene for tRNA(Tyr) overlaps by one nucleotide with the downstream tRNA(Cys) gene, which is located on the same strand. The overlapping nucleotide, a guanosine residue, thus encodes both the discriminator base of the tRNA(Tyr) and the 5'base of the tRNA(Cys). When cDNA clones of circularized forms of the tRNA(Tyr) are analyzed, the discriminator nucleotide is an adenosine residue rather than the genomically encoded guanosine. Thus, the tRNA(Tyr) is subjected to an RNA editing activity similar to that shown to exist in the mitochondria of two other animal species. Interestingly, some cDNA clones have several adenosine residues at their 3'-ends instead of the expected CCA-sequence. Furthermore, a review of sequence data from animal mitochondrial genomes suggests that only tRNAs whose discriminator bases are adenosines tend to have genes that overlap with downstream genes. Thus, polyadenylation seems to be a major component of the RNA editing machinery that affects overlapping genes in animal mitochondria.

摘要

在鸡的线粒体基因组中,tRNA(Tyr)基因与下游位于同一条链上的tRNA(Cys)基因有一个核苷酸的重叠。这个重叠的核苷酸是一个鸟苷残基,因此它既编码tRNA(Tyr)的判别碱基,也编码tRNA(Cys)的5'碱基。当分析tRNA(Tyr)环化形式的cDNA克隆时,判别核苷酸是一个腺苷残基,而不是基因组编码的鸟苷。因此,tRNA(Tyr)受到一种类似于在另外两种动物物种线粒体中存在的RNA编辑活性的作用。有趣的是,一些cDNA克隆在其3'末端有几个腺苷残基,而不是预期的CCA序列。此外,对动物线粒体基因组序列数据的综述表明,只有判别碱基为腺苷的tRNA倾向于具有与下游基因重叠的基因。因此,聚腺苷酸化似乎是影响动物线粒体中重叠基因的RNA编辑机制的一个主要组成部分。

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