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细菌光合反应中心P+QA状态结合H+离子的动力学:蛋白质内部的速率限制

Kinetics of H+ ion binding by the P+QA-state of bacterial photosynthetic reaction centers: rate limitation within the protein.

作者信息

Maróti P, Wraight C A

机构信息

Center for Biophysics and Computational Biology, University of Illinois, Urbana 81801-3838, USA.

出版信息

Biophys J. 1997 Jul;73(1):367-81. doi: 10.1016/S0006-3495(97)78077-9.

Abstract

The kinetics of flash-induced H+ ion binding by isolated reaction centers (RCs) of Rhodobacter sphaeroides, strain R-26, were measured, using pH indicators and conductimetry, in the presence of terbutryn to block electron transfer between the primary and secondary quinones (QA and QB), and in the absence of exogenous electron donors to the oxidized primary donor, P+, i.e., the P+QA-state. Under these conditions, proton binding by RCs is to the protein rather than to any of the cofactors. After light activation to form P+QA-, the kinetics of proton binding were monoexponential at all pH values studied. At neutral pH, the apparent bimolecular rate constant was close to the diffusional limit for proton transfer in aqueous solution (approximately 10(11) M-1 s-1), but increased significantly in the alkaline pH range (e.g., 2 x 10(13) M-1 s-1 at pH 10). The average slope of the pH dependence was -0.4 instead of -1.0, as might be expected for a H+ diffusion-controlled process. High activation energy (0.54 eV at pH 8.0) and weak viscosity dependence showed that H+ ion uptake by RCs is not limited by diffusion. The salt dependence of the H+ ion binding rate and the pK values of the protonatable amino acid residues of the reaction center implicated surface charge influences, and Gouy-Chapman theory provided a workable description of the ionic effects as arising from modulation of the pH at the surface of the RC. Incubation in D2O caused small increases in the pKs of the protonatable groups and a small, pH (pD)-dependent slowing of the binding rate. The salt, pH, temperature, viscosity, and D2O dependences of the proton uptake by RCs in the P+QA- state were accounted for by three considerations: 1) parallel pathways of H+ delivery to the RC, contributing to the observed (net) H+ disappearance; 2) rate limitation of the protonation of target groups within the protein by conformational dynamics; and 3) electrostatic influences of charged groups in the protein, via the surface pH.

摘要

利用pH指示剂和电导测定法,在存在特丁净以阻断初级醌和次级醌(QA和QB)之间的电子转移,且不存在向氧化态初级供体P+提供外源电子供体(即P+QA状态)的情况下,测量了球形红细菌R-26菌株分离的反应中心(RCs)光诱导的H+离子结合动力学。在这些条件下,反应中心的质子结合是与蛋白质而非任何辅因子结合。光激活形成P+QA-后,在所有研究的pH值下,质子结合动力学均为单指数形式。在中性pH下,表观双分子速率常数接近水溶液中质子转移的扩散极限(约10(11) M-1 s-1),但在碱性pH范围内显著增加(例如,在pH 10时为2 x 10(13) M-1 s-1)。pH依赖性的平均斜率为-0.4,而不是H+扩散控制过程预期的-1.0。高活化能(在pH 8.0时为0.54 eV)和弱粘度依赖性表明,反应中心对H+离子的摄取不受扩散限制。H+离子结合速率的盐依赖性以及反应中心可质子化氨基酸残基的pK值表明存在表面电荷影响,古依-查普曼理论为离子效应提供了一个可行的描述,即离子效应源于反应中心表面pH的调制。在D2O中孵育导致可质子化基团的pK值略有增加,以及结合速率出现轻微的、pH(pD)依赖性减慢。反应中心在P+QA状态下质子摄取的盐、pH、温度、粘度和D2O依赖性可通过以下三个因素来解释:1)H+传递到反应中心的平行途径,导致观察到的(净)H+消失;2)构象动力学对蛋白质内目标基团质子化的速率限制;3)蛋白质中带电基团通过表面pH产生的静电影响。

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