Steinhoff H J, Radzwill N, Thevis W, Lenz V, Brandenburg D, Antson A, Dodson G, Wollmer A
Lehrstuhl für Biophysik, Ruhr-Universität Bochum, Germany.
Biophys J. 1997 Dec;73(6):3287-98. doi: 10.1016/S0006-3495(97)78353-X.
A method was developed to determine the interspin distances of two or more nitroxide spin labels attached to specific sites in proteins. This method was applied to different conformations of spin-labeled insulins. The electron paramagnetic resonance (EPR) line broadening due to dipolar interaction is determined by fitting simulated EPR powder spectra to experimental data, measured at temperatures below 200 K to freeze the protein motion. The experimental spectra are composed of species with different relative nitroxide orientations and interspin distances because of the flexibility of the spin label side chain and the variety of conformational substates of proteins in frozen solution. Values for the average interspin distance and for the distance distribution width can be determined from the characteristics of the dipolar broadened line shape. The resulting interspin distances determined for crystallized insulins in the R6 and T6 structure agree nicely with structural data obtained by x-ray crystallography and by modeling of the spin-labeled samples. The EPR experiments reveal slight differences between crystal and frozen solution structures of the B-chain amino termini in the R6 and T6 states of hexameric insulins. The study of interspin distances between attached spin labels can be applied to obtain structural information on proteins under conditions where other methods like two-dimensional nuclear magnetic resonance spectroscopy or x-ray crystallography are not applicable.
已开发出一种方法来测定连接到蛋白质特定位点的两个或多个氮氧化物自旋标记之间的自旋间距。该方法应用于自旋标记胰岛素的不同构象。通过将模拟的电子顺磁共振(EPR)粉末光谱与在低于200 K的温度下测量的实验数据拟合来确定由于偶极相互作用导致的EPR线展宽,以冻结蛋白质运动。由于自旋标记侧链的灵活性以及冷冻溶液中蛋白质构象亚态的多样性,实验光谱由具有不同相对氮氧化物取向和自旋间距的物种组成。平均自旋间距和距离分布宽度的值可根据偶极展宽线形的特征来确定。在R6和T6结构中为结晶胰岛素测定的所得自旋间距与通过X射线晶体学和自旋标记样品建模获得的结构数据非常吻合。EPR实验揭示了六聚体胰岛素R6和T6状态下B链氨基末端的晶体结构和冷冻溶液结构之间的细微差异。对连接的自旋标记之间的自旋间距的研究可用于在二维核磁共振光谱或X射线晶体学等其他方法不适用的条件下获取蛋白质的结构信息。