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地衣芽孢杆菌表型和基因型特征分析及新基因组变种的描述

Contribution to phenotypic and genotypic characterization of Bacillus licheniformis and description of new genomovars.

作者信息

Manachini P L, Fortina M G, Levati L, Parini C

机构信息

Universià degli Studi di Milano, Dipartimento di Scienze e Tecnologie Alimentari e Microbiologiche, Italy.

出版信息

Syst Appl Microbiol. 1998 Dec;21(4):520-9. doi: 10.1016/S0723-2020(98)80064-7.

Abstract

A study of phenotypic and genotypic characteristics was carried out on 182 strains isolated from soil of different geographical areas; the type strains were B. licheniformis, B. subtilis, B. pumilus, B. cereus and B. coagulans. The results showed, primarily on the basis of phenotypic features, that all the isolates belonged to the B. licheniformis species, however DNA relatedness studies revealed only 161 to be genetically related to B. licheniformis, the DNA relatedness levels ranging from 66 to 100%. The other 21 isolates appeared to be genetically distinct not only from B. licheniformis but also from B. subtilis and B. pumilus, where there were low levels of DNA relatedness (from 4 to 37%). Nevertheless the ARDRA results indicate that the 21 atypical isolates were phylogenetically related to B. licheniformis. Our data and the phenotypic homogeneity found suggest the presence of three different genomovars.

摘要

对从不同地理区域土壤中分离出的182株菌株进行了表型和基因型特征研究;模式菌株为地衣芽孢杆菌、枯草芽孢杆菌、短小芽孢杆菌、蜡样芽孢杆菌和凝结芽孢杆菌。结果表明,主要基于表型特征,所有分离株均属于地衣芽孢杆菌种,然而DNA相关性研究显示,只有161株与地衣芽孢杆菌存在基因相关性,DNA相关性水平在66%至100%之间。另外21株分离株不仅在基因上与地衣芽孢杆菌不同,而且与枯草芽孢杆菌和短小芽孢杆菌也不同,它们之间的DNA相关性水平较低(4%至37%)。然而,ARDRA结果表明,这21株非典型分离株在系统发育上与地衣芽孢杆菌相关。我们的数据以及发现的表型同质性表明存在三种不同的基因组变种。

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