Amend J P, Shock E L
Department of Earth and Planetary Sciences, Washington University, CB 1169 St. Louis, MO 63130, USA.
FEMS Microbiol Rev. 2001 Apr;25(2):175-243. doi: 10.1111/j.1574-6976.2001.tb00576.x.
Thermophilic and hyperthermophilic Archaea and Bacteria have been isolated from marine hydrothermal systems, heated sediments, continental solfataras, hot springs, water heaters, and industrial waste. They catalyze a tremendous array of widely varying metabolic processes. As determined in the laboratory, electron donors in thermophilic and hyperthermophilic microbial redox reactions include H2, Fe(2+), H2S, S, S2O3(2-), S4O6(2-), sulfide minerals, CH4, various mono-, di-, and hydroxy-carboxylic acids, alcohols, amino acids, and complex organic substrates; electron acceptors include O2, Fe(3+), CO2, CO, NO3(-), NO2(-), NO, N2O, SO4(2-), SO3(2-), S2O3(2-), and S. Although many assimilatory and dissimilatory metabolic reactions have been identified for these groups of microorganisms, little attention has been paid to the energetics of these reactions. In this review, standard molal Gibbs free energies (DeltaGr(0)) as a function of temperature to 200 degrees C are tabulated for 370 organic and inorganic redox, disproportionation, dissociation, hydrolysis, and solubility reactions directly or indirectly involved in microbial metabolism. To calculate values of DeltaGr(0) for these and countless other reactions, the apparent standard molal Gibbs free energies of formation (DeltaG(0)) at temperatures to 200 degrees C are given for 307 solids, liquids, gases, and aqueous solutes. It is shown that values of DeltaGr(0) for many microbially mediated reactions are highly temperature dependent, and that adopting values determined at 25 degrees C for systems at elevated temperatures introduces significant and unnecessary errors. The metabolic processes considered here involve compounds that belong to the following chemical systems: H-O, H-O-N, H-O-S, H-O-N-S, H-O-C(inorganic), H-O-C, H-O-N-C, H-O-S-C, H-O-N-S-C(amino acids), H-O-S-C-metals/minerals, and H-O-P. For four metabolic reactions of particular interest in thermophily and hyperthermophily (knallgas reaction, anaerobic sulfur and nitrate reduction, and autotrophic methanogenesis), values of the overall Gibbs free energy (DeltaGr) as a function of temperature are calculated for a wide range of chemical compositions likely to be present in near-surface and deep hydrothermal and geothermal systems.
嗜热和超嗜热古菌与细菌已从海洋热液系统、加热的沉积物、陆地硫质喷气孔、温泉、热水器和工业废料中分离出来。它们催化了大量广泛多样的代谢过程。在实验室测定中,嗜热和超嗜热微生物氧化还原反应中的电子供体包括H₂、Fe²⁺、H₂S、S、S₂O₃²⁻、S₄O₆²⁻、硫化物矿物、CH₄、各种单羧酸、二羧酸和羟基羧酸、醇类、氨基酸以及复杂有机底物;电子受体包括O₂、Fe³⁺、CO₂、CO、NO₃⁻、NO₂⁻、NO、N₂O、SO₄²⁻、SO₃²⁻、S₂O₃²⁻和S。尽管已为这些微生物群体鉴定出许多同化和异化代谢反应,但对这些反应的能量学关注甚少。在本综述中,列出了370个直接或间接参与微生物代谢的有机和无机氧化还原、歧化、解离、水解和溶解反应在温度至200℃时的标准摩尔吉布斯自由能(ΔGr⁰)与温度的函数关系。为了计算这些反应以及无数其他反应的ΔGr⁰值,给出了307种固体、液体、气体和水溶液溶质在温度至200℃时的表观标准摩尔生成吉布斯自由能(ΔG⁰)。结果表明,许多微生物介导反应的ΔGr⁰值高度依赖于温度,并且在高温系统中采用在25℃下测定的值会引入显著且不必要的误差。这里考虑的代谢过程涉及属于以下化学体系的化合物:H - O、H - O - N、H - O - S、H - O - N - S、H - O - C(无机)、H - O - C、H - O - N - C、H - O - S - C、H - O - N - S - C(氨基酸)、H - O - S - C - 金属/矿物以及H - O - P。对于嗜热和超嗜热中特别感兴趣的四个代谢反应(爆鸣气反应、厌氧硫和硝酸盐还原以及自养产甲烷作用),计算了在近地表和深部热液及地热系统中可能存在的广泛化学组成下,总吉布斯自由能(ΔGr)与温度的函数值。