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本文引用的文献

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Rapid identification of bacteria from positive blood cultures by fluorescence-based PCR-single-strand conformation polymorphism analysis of the 16S rRNA gene.通过基于荧光的16S rRNA基因PCR-单链构象多态性分析从阳性血培养物中快速鉴定细菌。
J Clin Microbiol. 2000 Feb;38(2):513-20. doi: 10.1128/JCM.38.2.513-520.2000.
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Sequence-based identification of Mycobacterium species using the MicroSeq 500 16S rDNA bacterial identification system.使用MicroSeq 500 16S rDNA细菌鉴定系统基于序列鉴定分枝杆菌菌种。
J Clin Microbiol. 2000 Jan;38(1):246-51. doi: 10.1128/JCM.38.1.246-251.2000.
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Ribosomal DNA sequencing as a tool for identification of bacterial pathogens.核糖体DNA测序作为鉴定细菌病原体的一种工具。
Curr Opin Microbiol. 1999 Jun;2(3):299-305. doi: 10.1016/S1369-5274(99)80052-6.
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Comparison of phenotypic and genotypic techniques for identification of unusual aerobic pathogenic gram-negative bacilli.用于鉴定罕见需氧致病性革兰氏阴性杆菌的表型和基因型技术比较
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Improved amplification of microbial DNA from blood cultures by removal of the PCR inhibitor sodium polyanetholesulfonate.通过去除PCR抑制剂聚茴香脑磺酸钠提高从血培养物中扩增微生物DNA的效率
J Clin Microbiol. 1998 Oct;36(10):2810-6. doi: 10.1128/JCM.36.10.2810-2816.1998.
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Evaluation of PCR primers for early diagnosis of cytomegalovirus infection following liver transplantation.肝移植后巨细胞病毒感染早期诊断的聚合酶链反应引物评估
J Clin Microbiol. 1998 Feb;36(2):526-30. doi: 10.1128/JCM.36.2.526-530.1998.
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Leclercia adecarboxylata infections: case report and review.去羧勒克菌感染:病例报告及文献复习
Clin Infect Dis. 1997 Jul;25(1):79-81. doi: 10.1086/514514.
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Clinical comparison of BACTEC 9240 plus aerobic/F resin bottles and the isolator aerobic culture system for detection of bloodstream infections.BACTEC 9240加需氧/F树脂瓶与隔离器需氧培养系统用于检测血流感染的临床比较。
J Clin Microbiol. 1997 Jun;35(6):1469-72. doi: 10.1128/jcm.35.6.1469-1472.1997.
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Relief of amplification inhibition in PCR with bovine serum albumin or T4 gene 32 protein.使用牛血清白蛋白或T4基因32蛋白缓解PCR中的扩增抑制。
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10
Substances interfering with direct detection of Mycobacterium tuberculosis in clinical specimens by PCR: effects of bovine serum albumin.干扰通过聚合酶链反应(PCR)直接检测临床标本中结核分枝杆菌的物质:牛血清白蛋白的影响
J Clin Microbiol. 1996 Sep;34(9):2125-8. doi: 10.1128/jcm.34.9.2125-2128.1996.

通过16S rRNA基因扩增和测序直接从阳性血培养物中鉴定细菌:BACTEC 9240仪器真阳性和假阳性结果的评估

Direct identification of bacteria from positive blood cultures by amplification and sequencing of the 16S rRNA gene: evaluation of BACTEC 9240 instrument true-positive and false-positive results.

作者信息

Qian Q, Tang Y W, Kolbert C P, Torgerson C A, Hughes J G, Vetter E A, Harmsen W S, Montgomery S O, Cockerill F R, Persing D H

机构信息

Division of Clinical Microbiology, Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, Minnesota 55905, USA.

出版信息

J Clin Microbiol. 2001 Oct;39(10):3578-82. doi: 10.1128/JCM.39.10.3578-3582.2001.

DOI:10.1128/JCM.39.10.3578-3582.2001
PMID:11574575
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC88391/
Abstract

In a previous study which evaluated the BACTEC 9240 automated blood culture system (Becton Dickinson Diagnostic Instrument Systems, Sparks, Md.), we noted a 1.3% "instrument false-positive" rate. That is, the BACTEC system signaled that a bottle (BACTEC Plus Aerobic/F bottle or BACTEC Anaerobic Lytic/10 bottle) culture was positive but a Gram stain was negative and there was no growth of bacteria or yeasts on subculture to chocolate agar. Furthermore, from the same sample of blood, cultures for fungi using the Isolator blood culture system (Wampole Laboratories, Cranbury, N.J.) were negative for growth. For the present study, we evaluated 76 instrument false-positive samples for the presence of 16S ribosomal DNA using the MicroSeq 500 kit (PE Biosystems, Foster City, Calif.). These samples also were negative for fungi by the Isolator method. This kit has a PCR module and sequencing module for the amplification and sequencing of the 16S RNA gene and provides a database for sequence alignment and identification of bacteria. To optimize the assay, we evaluated the effect of adding 0.5% bovine serum albumin to the sample from blood culture bottles and found that it decreased the effects of inhibitors on the PCR. Two control groups of blood culture specimens were also evaluated. One group (n = 45) were "instrument true positives"; the instrument signaled positive, and subsequent Gram stains were positive and subcultures on chocolate agar grew bacteria. The other group (n = 20) were "instrument true negatives"; the instrument signaled negative, the Gram stain was negative, and subcultures on chocolate agar and from the Isolator tube on fungal media showed no growth. None of the 76 instrument false-positive samples had evidence for 16S rRNA gene sequences. All of the instrument true-positive samples and all of the instrument true-negative specimens were positive and negative, respectively, using the MicroSeq 500 kit. Total peripheral white blood cell counts were statistically significantly higher for patients who had instrument false-positive results than for patients who had instrument true-positive or true-negative results (P = 0.001). We conclude that instrument false positives signaled by the BACTEC 9240 system are not due to bacteria in the blood culture samples.

摘要

在之前一项评估BACTEC 9240自动血培养系统(Becton Dickinson诊断仪器系统公司,马里兰州斯帕克斯)的研究中,我们注意到有1.3%的“仪器假阳性”率。也就是说,BACTEC系统提示某一瓶(BACTEC Plus需氧/F瓶或BACTEC厌氧溶解/10瓶)培养物呈阳性,但革兰氏染色为阴性,且转种至巧克力琼脂上无细菌或酵母菌生长。此外,从同一血液样本中,使用Isolator血培养系统(Wampole实验室,新泽西州克兰伯里)进行的真菌培养未生长出真菌。在本研究中,我们使用MicroSeq 500试剂盒(PE生物系统公司,加利福尼亚州福斯特城)评估了76份仪器假阳性样本中16S核糖体DNA的存在情况。通过Isolator方法检测,这些样本的真菌结果也均为阴性。该试剂盒有一个用于16S RNA基因扩增和测序的PCR模块和测序模块,并提供一个用于序列比对和细菌鉴定的数据库。为优化检测方法,我们评估了向血培养瓶样本中添加0.5%牛血清白蛋白的效果,发现其可降低抑制剂对PCR的影响。还评估了两组血培养标本对照。一组(n = 45)为“仪器真阳性”;仪器提示阳性,随后革兰氏染色为阳性,转种至巧克力琼脂上生长出细菌。另一组(n = 20)为“仪器真阴性”;仪器提示阴性,革兰氏染色为阴性,转种至巧克力琼脂上以及从Isolator管接种至真菌培养基上均未生长。76份仪器假阳性样本均未发现16S rRNA基因序列的证据。使用MicroSeq 500试剂盒时所有仪器真阳性样本和所有仪器真阴性标本分别呈阳性和阴性。仪器假阳性结果患者的外周血白细胞总数在统计学上显著高于仪器真阳性或真阴性结果患者(P = 0.001)。我们得出结论,BACTEC 9240系统提示的仪器假阳性并非由于血培养样本中存在细菌。