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酵母对环境应激和饥饿反应的基因组学

The genomics of yeast responses to environmental stress and starvation.

作者信息

Gasch Audrey P, Werner-Washburne Margaret

机构信息

Department of Genome Science, Lawrence Berkeley National Laboratory, 1 Cyclotron Road 84-355, Berkeley, CA 94720, USA.

出版信息

Funct Integr Genomics. 2002 Sep;2(4-5):181-92. doi: 10.1007/s10142-002-0058-2. Epub 2002 Apr 30.

Abstract

Unicellular organisms such as yeast have evolved to survive constant fluctuations in their external surroundings by rapidly adapting their internal systems to meet the challenges of each new environment. One aspect of this cellular adaptation is the reorganization of genomic expression to the program required for growth in each environment. The reprogramming of genomic expression can be unveiled using DNA microarrays, which measure the relative transcript abundance of essentially every gene in an organism's genome. Characterizing environmentally triggered gene expression changes provides insights into when, where, and how each gene is expressed and offers a glimpse at the physiological response of the cells to changes in their surroundings. This review will focus on the genomic expression responses of the budding yeast Saccharomyces cerevisiae to diverse environmental changes, highlighting some of the themes that have emerged from the collection of published yeast genomic expression studies. The results of these studies present insights as to how yeast cells sense and respond to each new environment, and suggest mechanisms that this organism uses to survive stressful environmental changes.

摘要

单细胞生物,如酵母,已经进化出通过快速调整其内部系统以应对每个新环境的挑战来在外部环境的持续波动中生存的能力。这种细胞适应性的一个方面是将基因组表达重新组织为每个环境中生长所需的程序。基因组表达的重新编程可以通过DNA微阵列来揭示,DNA微阵列可测量生物体基因组中几乎每个基因的相对转录本丰度。表征环境触发的基因表达变化有助于深入了解每个基因何时、何地以及如何表达,并能让我们初步了解细胞对周围环境变化的生理反应。本综述将聚焦于出芽酵母酿酒酵母对各种环境变化的基因组表达反应,突出已发表的酵母基因组表达研究中出现的一些主题。这些研究结果揭示了酵母细胞如何感知并应对每个新环境,并提出了这种生物体用于在压力环境变化中生存的机制。

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