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1
Distribution of bacteria in the velocity gradient centrifuge.速度梯度离心机中细菌的分布。
Biophys J. 1976 May;16(5):389-405. doi: 10.1016/S0006-3495(76)85696-2.
2
Velocity sedimentation of organelles at low centrifugal force in an isokinetic gradient.在等速梯度中以低离心力对细胞器进行速度沉降。
Biochem J. 1978 Jul 15;174(1):303-7. doi: 10.1042/bj1740303.
3
A diffusion driven instability in systems that separate particles by velocity sedimentation.通过速度沉降分离颗粒的系统中的扩散驱动不稳定性。
Biophys J. 1976 May;16(5):407-16. doi: 10.1016/S0006-3495(76)85697-4.
4
Synchronization of mouse L-cells by a velocity sedimentation technique.通过速度沉降技术对小鼠L细胞进行同步化处理。
Biophys J. 1970 Sep;10(9):834-42. doi: 10.1016/S0006-3495(70)86338-X.
5
A model for sedimentation in inhomogeneous media. I. Dynamic density gradients from sedimenting co-solutes.非均匀介质中沉降的模型。I. 沉降共溶质产生的动态密度梯度
Biophys Chem. 2004 Mar 1;108(1-3):187-200. doi: 10.1016/j.bpc.2003.10.016.
6
Application of alkaline sucrose gradient centrifugation in the analysis of DNA replication after DNA damage.碱性蔗糖梯度离心法在DNA损伤后DNA复制分析中的应用。
Methods Mol Biol. 2009;521:329-42. doi: 10.1007/978-1-60327-815-7_18.
7
Separation of nanorods by density gradient centrifugation.通过密度梯度离心分离纳米棒。
J Chromatogr A. 2011 Jun 24;1218(25):3823-9. doi: 10.1016/j.chroma.2011.04.038. Epub 2011 Apr 20.
8
Elimination of bacteria from human semen during sperm preparation using density gradient centrifugation with a novel tube insert.使用新型管内插塞的密度梯度离心法从人类精液中去除细菌进行精子制备。
Andrologia. 2012 May;44 Suppl 1:513-7. doi: 10.1111/j.1439-0272.2011.01217.x. Epub 2011 Sep 26.
9
Cell cycle dynamics inferred from the static properties of cells in balanced growth.从平衡生长状态下细胞的静态特性推断细胞周期动力学。
J Gen Microbiol. 1982 Dec;128(12):2877-92. doi: 10.1099/00221287-128-12-2877.
10
Transport phenomena in zonal centrifuge rotors. I. Velocity and shear-stress distributions of fluid during acceleration.区带离心机转子中的传输现象。I. 加速过程中流体的速度和剪应力分布
Biophys J. 1968 Sep;8(9):973-90. doi: 10.1016/S0006-3495(68)86533-6.

引用本文的文献

1
Hypothesis: bacteria live on the edge of phase transitions with a cell cycle regulated by a water-clock.假说:细菌生活在相变的边缘,其细胞周期受水钟调控。
Theory Biosci. 2024 Nov;143(4):253-277. doi: 10.1007/s12064-024-00427-2. Epub 2024 Nov 6.
2
Fundamental principles in bacterial physiology-history, recent progress, and the future with focus on cell size control: a review.细菌生理学基础——历史、最新进展及未来展望,重点关注细胞大小控制:综述。
Rep Prog Phys. 2018 May;81(5):056601. doi: 10.1088/1361-6633/aaa628. Epub 2018 Jan 9.
3
Modelling and analysis of bacterial tracks suggest an active reorientation mechanism in Rhodobacter sphaeroides.细菌轨迹的建模和分析表明,球形红杆菌中存在一种主动重定向机制。
J R Soc Interface. 2014 Aug 6;11(97):20140320. doi: 10.1098/rsif.2014.0320.
4
Independence of buoyant cell density and growth rate in Escherichia coli.大肠杆菌中浮力细胞密度与生长速率的独立性
J Bacteriol. 1984 Apr;158(1):296-9. doi: 10.1128/jb.158.1.296-299.1984.
5
Buoyant density constancy during the cell cycle of Escherichia coli.大肠杆菌细胞周期中的浮力密度恒定性。
J Bacteriol. 1983 Sep;155(3):1027-32. doi: 10.1128/jb.155.3.1027-1032.1983.
6
Physiological control of repressible acid phosphatase gene transcripts in Saccharomyces cerevisiae.酿酒酵母中可阻遏酸性磷酸酶基因转录物的生理调控
Mol Cell Biol. 1983 May;3(5):839-53. doi: 10.1128/mcb.3.5.839-853.1983.
7
Variation in Escherichia coli buoyant density measured in Percoll gradients.在Percoll梯度中测得的大肠杆菌浮力密度的变化。
J Bacteriol. 1981 Oct;148(1):58-63. doi: 10.1128/jb.148.1.58-63.1981.
8
Cell cycle changes in the buoyant density of exponential-phase cells of Streptococcus faecium.粪肠球菌指数生长期细胞浮力密度的细胞周期变化。
J Bacteriol. 1987 Mar;169(3):1200-4. doi: 10.1128/jb.169.3.1200-1204.1987.
9
Rate and topography of cell wall synthesis during the division cycle of Salmonella typhimurium.鼠伤寒沙门氏菌分裂周期中细胞壁合成的速率与拓扑结构。
J Bacteriol. 1988 Jan;170(1):422-30. doi: 10.1128/jb.170.1.422-430.1988.
10
Buoyant density fluctuations during the cell cycle of Bacillus subtilis.枯草芽孢杆菌细胞周期中的浮力密度波动。
Arch Microbiol. 1987 Feb;147(1):68-72. doi: 10.1007/BF00492907.

本文引用的文献

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The Growth Rate of Individual Bacterial Cells.单个细菌细胞的生长速率。
J Bacteriol. 1932 Feb;23(2):147-53. doi: 10.1128/jb.23.2.147-153.1932.
2
Normal distribution of cell generation rate.细胞生成率的正态分布。
Exp Cell Res. 1962 Mar;26:439-50. doi: 10.1016/0014-4827(62)90150-7.
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GROWTH CHARACTERISITICS OF SOME GRAM-NEGATIVE BACTERIA.一些革兰氏阴性菌的生长特性
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A model for statistics of the cell division process.一种细胞分裂过程的统计学模型。
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Growth, cell and nuclear divisions in some bacteria.某些细菌中的生长、细胞分裂和核分裂
J Gen Microbiol. 1962 Nov;29:421-34. doi: 10.1099/00221287-29-3-421.
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Rate of growth of Bacillus cereus between divisions.蜡样芽孢杆菌分裂间期的生长速率。
J Gen Microbiol. 1962 Apr;28:15-33. doi: 10.1099/00221287-28-1-15.
7
Some environmental factors affecting the length of Escherichia coli organisms in continuous cultures.一些影响连续培养中大肠杆菌菌体长度的环境因素。
J Gen Microbiol. 1961 May;25:17-27. doi: 10.1099/00221287-25-1-17.
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An outline of the pattern of bacterial generation times.细菌代时模式概述。
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Characterization of macromolecules by constant velocity sedimentation.通过等速沉降法对大分子进行表征。
Nature. 1967 Jul 22;215(5099):360-3. doi: 10.1038/215360a0.
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Frictional coefficients of multisubunit structures. I. Theory.多亚基结构的摩擦系数。I. 理论。
Biopolymers. 1967 Feb;5(2):135-48. doi: 10.1002/bip.1967.360050202.

速度梯度离心机中细菌的分布。

Distribution of bacteria in the velocity gradient centrifuge.

作者信息

Koch A L, Blumberg G

出版信息

Biophys J. 1976 May;16(5):389-405. doi: 10.1016/S0006-3495(76)85696-2.

DOI:10.1016/S0006-3495(76)85696-2
PMID:1276374
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1334862/
Abstract

Cells in different parts of the cell cycle can be separated by brief centrifugation in a density stabilized gradient: the Mitchison-Vincent technique. The position of a cell in the tube depends upon its size, shape, and density, upon the gradients of density, viscosity, and centrifugal force through which it sediments, and upon time. A program to compute the velocities and integrate the velocity profile for particles of a particular size class is presented. Because enteric bacteria are a form intermediate between right cylinders and prolate ellipsoids of revolution, the program uses values for the frictional coefficient intermediate between those calculated for ellipsoids and for cylinders. The formula f=6pietab(a/b)1/2 possesses this property and because of its simplicity greatly speeds the calculations. A second program computes the distribution of masses and then of sedimentation constants for a bacterial population, expressed either as a frequency distribution or as total mass per s-class. The effect of the known variation in cell size at division is included in these calculations, which apply to organisms undergoing balanced, asynchronous growth in which mass increase is proportional to cell size. The two programs in conjunction compute the mass or cell-number profile in an arbitrary gradient. The programs have been used to design gradients to maximize the resolution of the technique.

摘要

细胞周期不同阶段的细胞可通过在密度稳定梯度中进行短暂离心来分离

即米奇森 - 文森特技术。细胞在管中的位置取决于其大小、形状和密度,取决于其沉降所经过的密度、粘度和离心力梯度,还取决于时间。本文给出了一个程序,用于计算特定尺寸类别的颗粒的速度并整合速度分布。由于肠道细菌是介于直圆柱体和长旋转椭球体之间的一种形态,该程序使用的摩擦系数值介于为椭球体和圆柱体计算的值之间。公式(f = 6\pi\eta ab(a/b)^{1/2})具有此特性,并且由于其简单性大大加快了计算速度。第二个程序计算细菌群体的质量分布,然后计算沉降常数分布,可表示为频率分布或每s类别的总质量。这些计算中考虑了已知的细胞分裂时大小变化的影响,适用于经历平衡、异步生长且质量增加与细胞大小成比例的生物体。这两个程序结合起来可计算任意梯度中的质量或细胞数分布。这些程序已用于设计梯度以最大化该技术的分辨率。