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通过限制性内切酶分析和噬菌体λ克隆对粗糙脉孢菌核糖体核糖核酸基因簇组织的研究。

A study of the organisation of the ribosomal ribonucleic acid gene cluster of Neurospora crassa by means of restriction endonuclease analysis and cloning in bacteriophage lambda.

作者信息

Cox R A, Peden K

出版信息

Mol Gen Genet. 1979 Jul 2;174(1):17-24. doi: 10.1007/BF00433300.

DOI:10.1007/BF00433300
PMID:158122
Abstract
  1. Total Neurospora crassa DNA was restricted with endonucleases and fragments carrying rRNA coding sequences were identified by hybridization with Xenopus laevis ribosomal DNA probes. 2. The repeating unit of the rRNA gene cluster was found to be 8.6 kbp, arranged in a head-to-tail fashion. 3. Digestion with Hind III yielded fragments of 3.4 kbp and 5.2 kbp and both were cloned. 4. Digestion with Eco RI yielded fragments of 2.2 kbp, 3.0 kbp and 3.4 kbp; the 3.0 kbp fragment was cloned. 5. Sequences coding for RNA (S-rRNA)1 of the smaller subribosomal particle were found (at least 90%) in the 2.2 kbp EcoRI subfragment of the 5.2 kbp Hind III fragment. 6. The coding sequences for the major RNA species (L-rRNA) of the larger subribosomal particle were located mainly (at least 95%) in the 3.4 kbp Hind III fragment. 7. For comparison, a Hind III digest of total yeast DNA was cloned and recombinants containing a 6.4 kbp rDNA fragment were isolated.
摘要
  1. 粗糙脉孢菌的总DNA用核酸内切酶进行酶切,携带rRNA编码序列的片段通过与非洲爪蟾核糖体DNA探针杂交来鉴定。2. 发现rRNA基因簇的重复单元为8.6千碱基对,呈头对头的方式排列。3. 用Hind III酶切产生3.4千碱基对和5.2千碱基对的片段,二者都被克隆。4. 用Eco RI酶切产生2.2千碱基对、3.0千碱基对和3.4千碱基对的片段;3.0千碱基对的片段被克隆。5. 在5.2千碱基对Hind III片段的2.2千碱基对EcoRI亚片段中发现了编码较小亚核糖体颗粒RNA(S-rRNA)1的序列(至少90%)。6. 较大亚核糖体颗粒主要RNA种类(L-rRNA)的编码序列主要(至少95%)位于3.4千碱基对的Hind III片段中。7. 作为比较,将总酵母DNA的Hind III酶切产物进行克隆,并分离出含有6.4千碱基对rDNA片段的重组体。

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1
A study of the organisation of the ribosomal ribonucleic acid gene cluster of Neurospora crassa by means of restriction endonuclease analysis and cloning in bacteriophage lambda.通过限制性内切酶分析和噬菌体λ克隆对粗糙脉孢菌核糖体核糖核酸基因簇组织的研究。
Mol Gen Genet. 1979 Jul 2;174(1):17-24. doi: 10.1007/BF00433300.
2
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Biochem J. 1980 Apr 1;187(1):75-90. doi: 10.1042/bj1870075.
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Neurospora crassa nuclear genome contains analogy of Saccharomyces cerevisiae genes for ribosomal RNA processing.粗糙脉孢菌的核基因组含有与酿酒酵母核糖体RNA加工相关基因的类似物。
Curr Genet. 1987;12(3):225-9. doi: 10.1007/BF00436884.
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Organization of the ribosomal ribonucleic acid gene cluster of Neurospora crassa by means of restriction endonucleases and cloning in bacteriophage lambda [proceedings].用限制性内切酶和噬菌体λ克隆法对粗糙脉孢菌核糖体核糖核酸基因簇的组织研究[会议论文集]
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Ribonucleic acid splicing in Neurospora Mitochondria: secondary structure of the 35S ribosomal precursor ribonucleic acid investigated by digestion with ribonuclease III and by electron microscopy.粗糙脉孢菌线粒体中的核糖核酸剪接:用核糖核酸酶III消化和电子显微镜研究35S核糖体前体核糖核酸的二级结构
Biochemistry. 1981 May 12;20(10):2836-42. doi: 10.1021/bi00513a020.
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Primary structure of the non-transcribed spacer region and flanking sequences of the ribosomal DNA of Neurospora crassa and comparison with other organisms.粗糙脉孢菌核糖体DNA非转录间隔区及其侧翼序列的一级结构以及与其他生物的比较。
Biochem Biophys Res Commun. 1990 Jul 16;170(1):187-93. doi: 10.1016/0006-291x(90)91258-t.

引用本文的文献

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Chromosome rearrangements that involve the nucleolus organizer region in Neurospora.涉及粗糙脉孢菌核仁组织区的染色体重排。
Genetics. 1995 Nov;141(3):909-23. doi: 10.1093/genetics/141.3.909.
2
Distribution of sequences common to the 25--28S-ribonucleic acid genes of Xenopus laevis and Neurospora crassa.非洲爪蟾和粗糙脉孢菌25-28S核糖体核糖核酸基因共有序列的分布
Biochem J. 1980 Apr 1;187(1):75-90. doi: 10.1042/bj1870075.
3
Chromosomal loci of Neurospora crassa.粗糙脉孢菌的染色体位点。

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A membrane-filter technique for the detection of complementary DNA.一种用于检测互补DNA的膜过滤技术。
Biochem Biophys Res Commun. 1966 Jun 13;23(5):641-6. doi: 10.1016/0006-291x(66)90447-5.
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Hybrid 80S monomers formed from subunits of ribosomes from protozoa, ungi, plants, and mammals.由原生动物、真菌、植物和哺乳动物的核糖体亚基形成的杂交80S单体。
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Defective pairing and synaptonemal complex formation in a Sordaria mutant (spo44) with a translocated segment of the nucleolar organizer.在一个具有核仁组织区易位片段的粪壳菌突变体(spo44)中配对缺陷和联会复合体形成异常
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7
Cloning and characterization of the rDNA repeat unit of Podospora anserina.嗜鸟粪盘菌核糖体DNA重复单元的克隆与特性分析
Mol Gen Genet. 1985;199(1):154-7. doi: 10.1007/BF00327526.
8
Reversal of a Neurospora translocation by crossing over involving displaced rDNA, and methylation of the rDNA segments that result from recombination.通过涉及移位核糖体DNA(rDNA)的交换实现粗糙脉孢菌易位的逆转,以及重组产生的rDNA片段的甲基化。
Genetics. 1986 Nov;114(3):791-817. doi: 10.1093/genetics/114.3.791.
9
Restriction endonuclease mapping by crossed contact hybridization: the ribosomal RNA genes of Achlya ambisexualis.通过交叉接触杂交进行限制性内切酶图谱分析:两性绵霉的核糖体RNA基因
Nucleic Acids Res. 1979 Nov 24;7(6):1567-78. doi: 10.1093/nar/7.6.1567.
Biochem Genet. 1970 Oct;4(5):603-15. doi: 10.1007/BF00486098.
4
Retention of common nucleotide sequences in the ribosomal deoxyribonucleic acid of eukaryotes and some of their physical characteristics.真核生物核糖体脱氧核糖核酸中常见核苷酸序列的保留及其一些物理特性。
Biochemistry. 1971 Jul 6;10(14):2761-9. doi: 10.1021/bi00790a017.
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A quantitative assay for DNA-RNA hybrids with DNA immobilized on a membrane.一种用于检测固定在膜上的DNA与RNA杂交体的定量分析方法。
J Mol Biol. 1965 Jul;12(3):829-42. doi: 10.1016/s0022-2836(65)80331-x.
6
Supercoiled circular DNA-protein complex in Escherichia coli: purification and induced conversion to an opern circular DNA form.大肠杆菌中的超螺旋环状DNA-蛋白质复合物:纯化及诱导转化为开放环状DNA形式
Proc Natl Acad Sci U S A. 1969 Apr;62(4):1159-66. doi: 10.1073/pnas.62.4.1159.
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Redundant DNA of Neurospora crassa.粗糙脉孢菌的冗余DNA。
Biochem Genet. 1972 Feb;6(1):41-9. doi: 10.1007/BF00485964.
8
Ribosomal RNA genes of Neurospora: isolation and characterization.粗糙脉孢菌的核糖体RNA基因:分离与特性分析
Proc Natl Acad Sci U S A. 1972 Nov;69(11):3256-9. doi: 10.1073/pnas.69.11.3256.
9
Detection of specific sequences among DNA fragments separated by gel electrophoresis.在通过凝胶电泳分离的DNA片段中检测特定序列。
J Mol Biol. 1975 Nov 5;98(3):503-17. doi: 10.1016/s0022-2836(75)80083-0.
10
Nucleotide sequence of the rightward operator of phage lambda.噬菌体λ右向操纵基因的核苷酸序列。
Proc Natl Acad Sci U S A. 1975 Mar;72(3):1184-8. doi: 10.1073/pnas.72.3.1184.